RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 RALBP11234 206 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 PKMP14618 531 aaKnown RBP23.68■■□□□ 1.38
RRP9-201ENST00000232888 GMPRP36959 345 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 GRIA2P42262 883 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 OCRLQ01968 901 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 NFATC2Q13469 925 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 ZNF460Q14592 562 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 OR6Y1Q8NGX8 325 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 DTX3LQ8TDB6 740 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 HEXDCQ8WVB3 486 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 TRIM55Q9BYV6 548 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 POMKQ9H5K3 350 aa23.68■■□□□ 1.38
RRP9-201ENST00000232888 CCDC189A1A4V9 331 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 TBC1D3BA6NDS4 549 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 GAPDHSO14556 408 aaPredicted RBP23.67■■□□□ 1.38
RRP9-201ENST00000232888 TRIM13O60858 407 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 PRSS56P0CW18 603 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 CCDC166P0CW27 439 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 KCNA4P22459 653 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 RPS3P23396 243 aaKnown RBP eCLIP23.67■■□□□ 1.38
RRP9-201ENST00000232888 GDI1P31150 447 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 VIPR1P32241 457 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 LTBRP36941 435 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 SKIV2L2P42285 1042 aaKnown RBP23.67■■□□□ 1.38
RRP9-201ENST00000232888 HNRNPH2P55795 449 aaKnown RBP23.67■■□□□ 1.38
RRP9-201ENST00000232888 PTSQ03393 145 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 DLG1Q12959 904 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 ARHGEF7Q14155 803 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 CHRDL2Q6WN34 429 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 TSPAN33Q86UF1 283 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 SUGP1Q8IWZ8 645 aaKnown RBP23.67■■□□□ 1.38
RRP9-201ENST00000232888 OR8D1Q8WZ84 308 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 PBXIP1Q96AQ6 731 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 BIRC8Q96P09 236 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 CDH19Q9H159 772 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 TMEM245Q9H330 911 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 OXSMQ9NWU1 459 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 B4GALT6Q9UBX8 382 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 DOCK8Q8NF50 2099 aa23.67■■□□□ 1.38
RRP9-201ENST00000232888 A0A1W2PPC1 479 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 RGSL1A5PLK6 1076 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 AGAP14A8MT82 685 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 TMEM114B3SHH9 223 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 RHOBTB1O94844 696 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 TIMP2P16035 220 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 ZNF7P17097 686 aaPredicted RBP23.66■■□□□ 1.38
RRP9-201ENST00000232888 FMO4P31512 558 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 CDKN1CP49918 316 aaPredicted RBP23.66■■□□□ 1.38
RRP9-201ENST00000232888 PDAP1Q13442 181 aaKnown RBP23.66■■□□□ 1.38
RRP9-201ENST00000232888 CSHL1Q14406 222 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 FAM151BQ6UXP7 276 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 CRLF3Q8IUI8 442 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 RAVER1Q8IY67 606 aaKnown RBP23.66■■□□□ 1.38
RRP9-201ENST00000232888 FGF14Q92915 247 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 CCDC126Q96EE4 140 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 ASB8Q9H765 288 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 GTSE1Q9NYZ3 720 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 PKD2L2Q9NZM6 624 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 SUN2Q9UH99 717 aa23.66■■□□□ 1.38
RRP9-201ENST00000232888 A0A0U1RQS6 177 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 H3BMM5 538 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 PRMT5O14744 637 aaPredicted RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 VPS26AO75436 327 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 KAT7O95251 611 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 CTSLP07711 333 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 CHRM1P11229 460 aaPredicted RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 LHCGRP22888 699 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 XPAP23025 273 aaPredicted RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 TIAL1Q01085 375 aaKnown RBP eCLIP23.65■■□□□ 1.38
RRP9-201ENST00000232888 MESP2Q0VG99 397 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 ELAVL3Q14576 367 aaKnown RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 C9orf64Q5T6V5 341 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 UGT3A1Q6NUS8 523 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 EP400NLQ6ZTU2 488 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 RBFAQ8N0V3 343 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 PNPLA1Q8N8W4 532 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 SMRP1Q8NCR6 262 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 KCNJ9Q92806 393 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 P2RY12Q9H244 342 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 FAM96AQ9H5X1 160 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 THAP10Q9P2Z0 257 aaPredicted RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 XPR1Q9UBH6 696 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 FNDC3AQ9Y2H6 1198 aaKnown RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 OAS3Q9Y6K5 1087 aaKnown RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 USH1CQ9Y6N9 552 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 ARNTLO00327 626 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 NPC1O15118 1278 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 APODP05090 189 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 SBK3P0C264 359 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 IFT88Q13099 833 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 ZNF234Q14588 700 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 LIPMQ5VYY2 423 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 DPPA4Q7L190 304 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 SERPINA9Q86WD7 417 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 ULK4Q96C45 1275 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 SIKE1Q9BRV8 207 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 CPSF2Q9P2I0 782 aaKnown RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 NFKBIL1Q9UBC1 381 aaPredicted RBP23.65■■□□□ 1.38
RRP9-201ENST00000232888 KIAA1549LQ6ZVL6 1849 aa23.65■■□□□ 1.38
RRP9-201ENST00000232888 C16orf96A6NNT2 1141 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms