RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 EPHA3P29320 983 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 CCR2P41597 374 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 SULT2A1Q06520 285 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 LYPLAL1Q5VWZ2 237 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 PAQR3Q6TCH7 311 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 LYSMD3Q7Z3D4 306 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 SCUBE1Q8IWY4 988 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 PIANPQ8IYJ0 282 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 PAF1Q8N7H5 531 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 ENDOVQ8N8Q3 282 aaKnown RBP17.55■□□□□ 0.4
GCDH-201ENST00000222214 ATOH8Q96SQ7 321 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 CEP44Q9C0F1 390 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 MTIF3Q9H2K0 278 aaKnown RBP17.55■□□□□ 0.4
GCDH-201ENST00000222214 WDR55Q9H6Y2 383 aaPredicted RBP17.55■□□□□ 0.4
GCDH-201ENST00000222214 BPIFA1Q9NP55 256 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 TDP1Q9NUW8 608 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 NOP53Q9NZM5 478 aaKnown RBP17.55■□□□□ 0.4
GCDH-201ENST00000222214 DPP7Q9UHL4 492 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 TRMT6Q9UJA5 497 aaKnown RBP17.55■□□□□ 0.4
GCDH-201ENST00000222214 INTS6Q9UL03 887 aaKnown RBP17.55■□□□□ 0.4
GCDH-201ENST00000222214 CLEC4EQ9ULY5 219 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 FAM50BQ9Y247 325 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 MED16Q9Y2X0 877 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 A0A1W2PQ67 120 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 PEX11AO75192 247 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 CIB2O75838 187 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 CPOXP36551 454 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 PTPN5P54829 565 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 DMC1Q14565 340 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 RYBPQ8N488 228 aaPredicted RBP17.55■□□□□ 0.4
GCDH-201ENST00000222214 OTUB2Q96DC9 234 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 SMIM14Q96QK8 99 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 LYSMD1Q96S90 227 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 GPR21Q99679 349 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 ACSS2Q9NR19 701 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 HCFC1R1Q9NWW0 138 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 SLC25A13Q9UJS0 675 aa17.55■□□□□ 0.4
GCDH-201ENST00000222214 CAPN8A6NHC0 703 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 C5orf67F2Z3F1 127 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 NEMP1O14524 444 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 SUPT7LO94864 414 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 RHOP08100 348 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 SRCP12931 536 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 COX4I1P13073 169 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 HNRNPLP14866 589 aaKnown RBP eCLIP17.54■□□□□ 0.4
GCDH-201ENST00000222214 TCF3P15923 654 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 KCNC1P48547 511 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 INHBCP55103 352 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 HERC3Q15034 1050 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 TEAD2Q15562 447 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 PDCD2Q16342 344 aaPredicted RBP17.54■□□□□ 0.4
GCDH-201ENST00000222214 TAS2R42Q7RTR8 314 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 NET1Q7Z628 596 aaPredicted RBP17.54■□□□□ 0.4
GCDH-201ENST00000222214 UBE2Q1Q7Z7E8 422 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 CBARPQ8N350 705 aaPredicted RBP17.54■□□□□ 0.4
GCDH-201ENST00000222214 PHTF2Q8N3S3 785 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 PCDH20Q8N6Y1 951 aaKnown RBP17.54■□□□□ 0.4
GCDH-201ENST00000222214 RP9Q8TA86 221 aaKnown RBP17.54■□□□□ 0.4
GCDH-201ENST00000222214 ACTRT2Q8TDY3 377 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 MICAL1Q8TDZ2 1067 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 RTKNQ9BST9 563 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 SHCBP1LQ9BZQ2 653 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 MEAF6Q9HAF1 191 aa17.54■□□□□ 0.4
GCDH-201ENST00000222214 RGSL1A5PLK6 1076 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 E5RI56 91 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 NRG2O14511 850 aaPredicted RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 PRMT5O14744 637 aaPredicted RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 ZNF821O75541 412 aaPredicted RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 RB1P06400 928 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 POU2F2P09086 479 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 CTPS1P17812 591 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 HLA-FP30511 346 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 CDKN1CP49918 316 aaPredicted RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 IL2P60568 153 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 OR4D1Q15615 310 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 TRMT5Q32P41 509 aaKnown RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 SETMARQ53H47 684 aaPredicted RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 PTGR2Q8N8N7 351 aaPredicted RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 GRIN3AQ8TCU5 1115 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 FAM161BQ96MY7 647 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 THTPAQ9BU02 230 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 CPEB1Q9BZB8 566 aaKnown RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 SMG9Q9H0W8 520 aaKnown RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 P2RY12Q9H244 342 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 ZNF385DQ9H6B1 395 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 RNF112Q9ULX5 631 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 ZNF106Q9H2Y7 1883 aaKnown RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 C1orf232A0A0U1RR37 186 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 H3BMM5 538 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 SDHDO14521 159 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 MOSPD3O75425 235 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 ALPIP09923 528 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 MTHFD2P13995 350 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 ZNF7P17097 686 aaPredicted RBP17.53■□□□□ 0.4
GCDH-201ENST00000222214 ITGALP20701 1170 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 RPS3P23396 243 aaKnown RBP eCLIP17.53■□□□□ 0.4
GCDH-201ENST00000222214 UNC50Q53HI1 259 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 DGKKQ5KSL6 1271 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 CTSL3PQ5NE16 218 aa17.53■□□□□ 0.4
GCDH-201ENST00000222214 SWT1Q5T5J6 900 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms