RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 YIPF2Q9BWQ6 316 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 NCKIPSDQ9NZQ3 722 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CD84Q9UIB8 345 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 SMIM31A0A1B0GVY4 71 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 FKBP9O95302 570 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 MT-CO1P00395 513 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 MLNP12872 115 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 HLA-EP13747 358 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 HALP42357 657 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 DMPKQ09013 629 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ESRP1Q6NXG1 681 aaKnown RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 FKBP9P1Q75LS8 142 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ZNF513Q8N8E2 541 aaPredicted RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 KLK6Q92876 244 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 OMA1Q96E52 524 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 MED8Q96G25 268 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 GORASP1Q9BQQ3 440 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 FAM83DQ9H4H8 585 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ATP6V1C1P21283 382 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 IRS1P35568 1242 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 GRIA1P42261 906 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ELP6Q0PNE2 266 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 FNBP1LQ5T0N5 605 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CRTC3Q6UUV7 619 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ARHGAP36Q6ZRI8 547 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 C11orf96Q7Z7L8 435 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CLVS1Q8IUQ0 354 aaPredicted RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 SLC41A1Q8IVJ1 513 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 KYQ8NBH2 561 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 OR2AP1Q8NGE2 309 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 HMGB4Q8WW32 186 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 TCEAL4Q96EI5 215 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 SERAC1Q96JX3 654 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ZDHHC4Q9NPG8 344 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 RAD18Q9NS91 495 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 TRIM24O15164 1050 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ZBTB14O43829 449 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CCNT2O60583 730 aaKnown RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CLASP2O75122 1294 aaKnown RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 TMEM63AO94886 807 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 UNC5CO95185 931 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 PTGIRP43119 386 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CCNHP51946 323 aaPredicted RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CARD16Q5EG05 197 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ARSIQ5FYB1 569 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 SLC9A4Q6AI14 798 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 PLEKHM3Q6ZWE6 761 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 HEATR4Q86WZ0 1026 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 MAGEC3Q8TD91 643 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 OTUB2Q96DC9 234 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 DNAJC1Q96KC8 554 aaKnown RBP9.39□□□□□ -0.91
CCDC113-201ENST00000219299 ZDHHC7Q9NXF8 308 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 VPS51Q9UID3 782 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 GPSM3Q9Y4H4 160 aa9.39□□□□□ -0.91
CCDC113-201ENST00000219299 CNTRLQ7Z7A1 2325 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 A0A087WXM4 84 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 H0YGN5 161 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 MAPK9P45984 424 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 CHRNB3Q05901 458 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 RFTN1Q14699 578 aaPredicted RBP9.38□□□□□ -0.91
CCDC113-201ENST00000219299 PAFAH1B3Q15102 231 aaKnown RBP9.38□□□□□ -0.91
CCDC113-201ENST00000219299 TCEAL5Q5H9L2 206 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 STXBP5Q5T5C0 1151 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 PIK3R6Q5UE93 754 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 SEL1L3Q68CR1 1132 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 RNF43Q68DV7 783 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 MSANTD2Q6P1R3 559 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 FAM9CQ8IZT9 166 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 AHI1Q8N157 1196 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 FBXO39Q8N4B4 442 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 C1orf74Q96LT6 269 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 FCRL5Q96RD9 977 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 LINC00597Q9H2U6 94 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 NMRAL1Q9HBL8 299 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 ARL15Q9NXU5 204 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 SELENONQ9NZV5 590 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 IGSF9Q9P2J2 1179 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 GLYATL1P3A0A0U1RQE8 302 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 A0A1W2PQ67 120 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 C2orf71A6NGG8 1288 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 AGRPO00253 132 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 TPP1O14773 563 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 CATP04040 527 aaKnown RBP9.38□□□□□ -0.91
CCDC113-201ENST00000219299 FBXW4P57775 412 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 ZNF252P-AS1Q0IIN9 211 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 GALNT2Q10471 571 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 SPDYE7PQ495Y7 208 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 KCTD21Q4G0X4 260 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 TMEM25Q86YD3 366 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 DCAF4L2Q8NA75 395 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 SLC43A3Q8NBI5 491 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 OR52K2Q8NGK3 314 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 CD101Q93033 1021 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 MRPS26Q9BYN8 205 aaKnown RBP9.38□□□□□ -0.91
CCDC113-201ENST00000219299 LIMD1Q9UGP4 676 aa9.38□□□□□ -0.91
CCDC113-201ENST00000219299 H3BMM5 538 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms