RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 C2P06681 752 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ELAVL2Q12926 359 aaKnown RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ITGA7Q13683 1181 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 UNC5BQ8IZJ1 945 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF433Q8N7K0 673 aaPredicted RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 KCT2Q8NC54 265 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 GNEQ9Y223 722 aaKnown RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ARL5AQ9Y689 179 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 RPN2P04844 631 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 MYCLP1P12525 358 aaPredicted RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 PEX2P28328 305 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 CCR3P51677 355 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 QPRTQ15274 297 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 NKX2-3Q8TAU0 364 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 HMCESQ96FZ2 354 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 ITCHQ96J02 903 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 GFM1Q96RP9 751 aaKnown RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TCF25Q9BQ70 676 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 VPS51Q9UID3 782 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 RPS6KA6Q9UK32 745 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 LOC110117498-PIK3R3F6TDL0 507 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 SGTAO43765 313 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 XYLBO75191 536 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 ELFN1P0C7U0 828 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 PSMD8P48556 350 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 CDK18Q07002 472 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 ZACNQ401N2 412 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TEX47Q8TBZ9 253 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 RERGQ96A58 199 aaPredicted RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 CLK4Q9HAZ1 481 aaKnown RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 SH3GLB1Q9Y371 365 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 AGLP35573 1532 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 FSCN2O14926 492 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 SMAD9O15198 467 aaKnown RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC25A12O75746 678 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 OTCP00480 354 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 MC1RQ01726 317 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 KLF10Q13118 480 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 PSRC1Q6PGN9 363 aaPredicted RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 SMARCD3Q6STE5 483 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 RPTNQ6XPR3 784 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TMEM139Q8IV31 216 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 PPCDCQ96CD2 204 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 C1GALT1C1Q96EU7 318 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 ADAM28Q9UKQ2 775 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 KIAA1210Q9ULL0 1709 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 OR51F1A6NGY5 319 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 DNM1LO00429 736 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 AP3D1O14617 1153 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TRBC1P01850 177 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 FCER2P06734 321 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 RCVRNP35243 200 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 CHRNA4P43681 627 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 GLYATQ6IB77 296 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 ESRP1Q6NXG1 681 aaKnown RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 NANOGNBQ7Z5D8 188 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 DMRTB1Q96MA1 342 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 HSD17B14Q9BPX1 270 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 BCL9O00512 1426 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3DA0A087WVF3 549 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3IA0A087WXS9 549 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3EA0A087X179 549 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3KA0A087X1G2 549 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 A0A0G2JN53 185 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3FA6NER0 549 aaPredicted RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3LB9A6J9 549 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 E9PAM4 449 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 CXCL11O14625 94 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 KPNA6O60684 536 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 UGT2B4P06133 528 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3HP0C7X1 549 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 CORO1AP31146 461 aaKnown RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 PBX3P40426 434 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 CTSKP43235 329 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 POLR2JP52435 117 aaKnown RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 PPP2R2BQ00005 443 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 HSPB3Q12988 150 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3GQ6DHY5 549 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3CQ6IPX1 549 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF544Q6NX49 715 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 AGMOQ6ZNB7 445 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 BBS12Q6ZW61 710 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBC1D3Q8IZP1 549 aaPredicted RBP13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 GPC2Q8N158 579 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 LPGAT1Q92604 370 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 TBATAQ96M53 351 aa13.57□□□□□ -0.24
TGFBR3-201ENST00000212355 CASKO14936 926 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 CFHP08603 1231 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 LGALS3BPQ08380 585 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 EEF1AKMT1Q8WVE0 214 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC9A6Q92581 669 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 MYO19Q96H55 970 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 PPP3R2Q96LZ3 170 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 GORASP1Q9BQQ3 440 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 COL20A1Q9P218 1284 aa13.56□□□□□ -0.24
TGFBR3-201ENST00000212355 WBP11Q9Y2W2 641 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms