RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 LtfP08071 707 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mc1rQ01727 315 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tssk1bQ61241 365 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr26Q7TRB7 308 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Asz1Q8VD46 475 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Dhx36Q8VHK9 1001 aaKnown RBP15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ak5Q920P5 562 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr933Q9EQA0 308 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ap3m1Q9JKC8 418 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Katna1Q9WV86 491 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Btg4O70552 250 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fpr-rs3O88537 343 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mageb5Q14AN0 366 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Eif1adQ3THJ3 170 aaKnown RBP15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tmem198Q8BG75 360 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cgrrf1Q8BMJ7 332 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mettl3Q8C3P7 580 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Lrif1Q8CDD9 755 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pcdhb17Q91VD8 799 aa15.51■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ltn1Q6A009 1767 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ptger1P35375 405 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pou2f2Q00196 463 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rab26Q504M8 260 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ifi47Q61635 420 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr1105Q7TR58 312 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mfn1Q811U4 741 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Efr3aQ8BG67 819 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Syn3Q8JZP2 579 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 MfrpQ8K480 584 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gtf2ird2Q99NI3 936 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Smg9Q9DB90 520 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cdh22Q9WTP5 813 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Nhsl1Q8CAF4 1587 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 AprtP08030 180 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Acsl1P41216 699 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 CenplQ3U3S3 329 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Hesx1Q61658 185 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 OsgepQ8BWU5 335 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Sgpl1Q8R0X7 568 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tuba8Q9JJZ2 449 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cpxm1Q9Z100 722 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ssxb6A2BI74 170 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ism2D3Z6A3 493 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Il4i1O09046 630 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 PlaaP27612 794 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rfx2P48379 717 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Grin2cQ01098 1239 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 G2e3Q5RJY2 716 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Bnip1Q6QD59 228 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 UnkQ8BL48 810 aaKnown RBP15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Lsm14aQ8K2F8 462 aaKnown RBP15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mapk8Q91Y86 384 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Scd3Q99PL7 359 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Q9DA42 136 aa15.5■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ighv11-1A0A075B5R6 117 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Spin2dB1B0R2 236 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ctps2P70303 586 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Scn1bP97952 218 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Larp4bQ6A0A2 741 aaKnown RBP15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ugt2a1Q80X89 528 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Arhgap11aQ80Y19 987 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Noc4lQ8BHY2 516 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ptk7Q8BKG3 1062 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Klhl31Q8BWA5 634 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gpr21Q8BX79 349 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 RtknQ8C6B2 564 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fam126bQ8C729 530 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm5591Q8CDK1 855 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Asb1Q9WV74 336 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm10719E9Q7T3 227 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 SmgcF6VRN1 385 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 NadkP58058 439 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 UtyP79457 1212 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gtf2a2Q80ZM7 109 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cfap61Q8CEL2 1252 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Akr1c13Q8VC28 323 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pofut2Q8VHI3 429 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pmf1Q9CPV5 202 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Zcchc12Q9CZA5 402 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ift46Q9DB07 301 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Sned1Q70E20 1403 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pbx3O35317 434 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rad51Q08297 339 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Dok6Q2MHE5 331 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 LcorlQ3U285 600 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Kctd21Q3URF8 260 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Elmo1Q8BPU7 727 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Samd3Q8C4H2 520 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 BroxQ8K2Q7 411 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 AclyQ91V92 1091 aaKnown RBP15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fam122aQ9DB52 284 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc13a2Q9ES88 586 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 AadatQ9WVM8 425 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Elf4Q9Z2U4 655 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Wfdc16A2A5H4 111 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Xlr5bA2BI50 236 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 MndalD0QMC3 538 aaKnown RBP15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Kcnt2D3Z649 1135 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 PtpaP58389 323 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Col6a2Q02788 1034 aa15.49■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms