RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Clec2lP0C7M9 211 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Foxk1P42128 719 aaKnown RBP11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Impdh1P50096 514 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cyp2c39P56656 490 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Lrfn1Q2WF71 766 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Ppm1hQ3UYC0 513 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Skiv2lQ6NZR5 1244 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Fndc11Q80WB0 326 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Kctd13Q8BGV7 329 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Clec1aQ8BWY2 269 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Rftn2Q8CHX7 500 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Olfr617Q8VGA1 318 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Mark1Q8VHJ5 795 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 HnrnprQ8VHM5 632 aaKnown RBP11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Leng1Q9DB98 261 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Isca2Q9DCB8 154 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Mpp6Q9JLB0 553 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Shroom3Q9QXN0 1986 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Erich1E9PY43 332 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Sult2b1O35400 338 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Vmn2r1O70410 912 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cd4P06332 457 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Traf2P39429 501 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 InaP46660 501 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Btg3P50615 252 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pnrc1Q3TWH3 297 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm4951Q3UED7 406 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pacs2Q3V3Q7 862 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Dyrk2Q5U4C9 599 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Smarcd1Q61466 515 aaKnown RBP11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Defa17Q64016 82 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Lpcat4Q6NVG1 524 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Rtl3Q6P1Y1 553 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Olfr20Q7TRX9 314 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 IfneQ80ZF2 192 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 TufmQ8BFR5 452 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Krt75Q8BGZ7 551 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Noc4lQ8BHY2 516 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Nipal1Q8BMW7 416 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Sept11Q8C1B7 431 aaKnown RBP11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pi4k2bQ8CBQ5 469 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Plcl2Q8K394 1128 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Batf2Q8R1H8 277 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Akr1c13Q8VC28 323 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Dio3Q91ZI8 304 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Ankrd61Q9CQM6 421 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Shmt2Q9CZN7 504 aaKnown RBP11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cdh17Q9R100 827 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm28363A0A087WQW2 129 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Atxn1lP0C7T6 687 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gsdmc2Q2KHK6 480 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Sppl2bQ3TD49 578 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Fam131bQ3TY60 332 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 TceancQ3US16 359 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pla2g4dQ50L43 825 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Magee2Q52KG3 523 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Uimc1Q5U5Q9 727 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Mef2aQ60929 498 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Zzz3Q6KAQ7 910 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gsdmc3Q8CB12 480 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Nox1Q8CIZ9 591 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Olfr866Q8VFI7 312 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 GneQ91WG8 722 aaKnown RBP11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Trmt11Q9CWH5 460 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 H2bfmQ9DAB5 224 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Acnat1A2AKK5 416 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Olfr1200A2ATJ4 336 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Zar1lC3VD30 291 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm8369E9PZI3 166 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cyp2b23E9Q593 491 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Psmb10O35955 273 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Hes2O54792 157 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Alg6Q3TAE8 507 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Tmem173Q3TBT3 378 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Lrrc58Q3UGP9 366 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pnpla1Q3V1D5 599 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm5800Q497L3 186 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Kcnh1Q60603 989 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cyp4b1Q64462 511 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Taf1cQ6PDZ2 836 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Letm2Q7TNU7 480 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Arl5aQ80ZU0 179 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Usp45Q8K387 813 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Ppp1r8Q8R3G1 351 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 4930524N10RikQ9D519 233 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Sh2d4aQ9D7V1 421 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cyb5r1Q9DB73 305 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pold3Q9EQ28 462 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 NckipsdQ9ESJ4 714 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Il22bQ9JJY8 179 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Extl1Q9JKV7 669 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Syt5Q9R0N5 386 aa11.54□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm21083A0A0G2JFD5 256 aa11.53□□□□□ -0.56
Col9a1-202ENSMUST00000088349 4921501E09RikA0A0R4J054 908 aa11.53□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Ifit3bE9PV48 403 aa11.53□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Vmn2r120E9PX34 856 aa11.53□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm3526E9PZM0 191 aa11.53□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm20828J3KMI7 228 aa11.53□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Azin1O35484 448 aa11.53□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gpx3P46412 226 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms