RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Pnma8aQ80VM8 430 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Echs1Q8BH95 290 aaKnown RBP7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Dyrk4Q8BI55 632 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 R3hcc1lQ8BJM3 775 aaKnown RBP7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Tlk1Q8C0V0 766 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Q8CC96 669 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Lin52Q8CD94 116 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Dennd1cQ8CFK6 786 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Fnbp1lQ8K012 605 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Olfr697Q8VFM4 317 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Cyp2c70Q91W64 489 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Taf11Q99JX1 211 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Rnf146Q9CZW6 359 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Kctd4Q9D7X1 259 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Efhc1Q9D9T8 648 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Lrrc46Q9DAP0 323 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Ndst3Q9EQH7 873 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Tubb3Q9ERD7 450 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Cul3Q9JLV5 768 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Nt5cQ9JM14 200 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Rasgrp2Q9QUG9 608 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Fhl5Q9WTX7 284 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Cyb561d2Q9WUE3 222 aa7.55□□□□□ -1.2
Trim40-201ENSMUST00000087158 Dmrta2A2A9A2 531 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Skint11A7XV14 364 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 A630010A05RikA9C473 232 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Tsga10ipF7A1F0 157 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Ncam2O35136 837 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Pbx2O35984 430 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Yme1l1O88967 715 aaKnown RBP7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Gm5571P01639 130 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 P01669 111 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 AladP10518 330 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Mthfd2P18155 350 aaKnown RBP7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Man1a1P45700 655 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Upp1P52624 311 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Pex2P55098 305 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Lim2P56563 173 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Rpl26P61255 145 aaKnown RBP7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 VegfcP97953 415 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 AcadsQ07417 412 aaKnown RBP7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 SbplQ3TUY3 232 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Sec31bQ3TZ89 1158 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 MelkQ61846 643 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Mgat5bQ765H6 792 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Olfr366Q7TRY4 309 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 ClmQ7TSN2 230 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Bcas1Q80YN3 633 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Lrrc27Q80YS5 523 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Epb41l5Q8BGS1 731 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Timm29Q8BGX2 266 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 B3gnt5Q8BGY6 376 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Zfp595Q8BIN6 625 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Ccdc184Q8BMK5 191 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Zbtb33Q8BN78 671 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Prkaa2Q8BRK8 552 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Pggt1bQ8BUY9 377 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Plin5Q8BVZ1 463 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Itpk1Q8BYN3 419 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Mettl3Q8C3P7 580 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Zbtb8bQ8CII0 484 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Usp45Q8K387 813 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Sirt3Q8R104 334 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Cog4Q8R1U1 785 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Rbm12Q8R4X3 992 aaKnown RBP7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Olfr846Q8VET8 312 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Ndufs1Q91VD9 727 aaKnown RBP7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Arhgef3Q91X46 524 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 FtcdQ91XD4 541 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Pcdhga10Q91XY9 930 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Tekt2Q922G7 430 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Def8Q99J78 448 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Haus8Q99L00 373 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 StambpQ9CQ26 424 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Rgs10Q9CQE5 181 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Pih1d1Q9CQJ2 290 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Exoc2Q9D4H1 924 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Cldn22Q9D7U6 220 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Smg9Q9DB90 520 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Nmnat1Q9EPA7 285 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Clec1bQ9JL99 229 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Pdpk1Q9Z2A0 559 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Ern2Q9Z2E3 911 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Gm3604A0A087WPN2 559 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Igkv5-39A0A0G2JDV4 115 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Galntl6E5D8G1 601 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Vmn2r74E9PW21 853 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Gm8882E9Q7E4 283 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Raph1F2Z3U3 1266 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 CskP41241 450 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Hmx2P43687 273 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Slc16a1P53986 493 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Dsc2P55292 902 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Mpp1P70290 466 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Ctps2P70303 586 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Kir3dl1P83555 432 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Tmem207P86045 143 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 4930430A15RikQ05AC5 485 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Cd244Q07763 397 aa7.54□□□□□ -1.2
Trim40-201ENSMUST00000087158 Arid5aQ3U108 590 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms