RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 CenpuQ8C4M7 410 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tldc1Q8K0P3 455 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gsto2Q8K2Q2 248 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lgi2Q8K4Z0 550 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 BlmhQ8R016 455 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ptdss1Q99LH2 473 aaKnown RBP6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cyp4f15Q99N18 534 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Acot13Q9CQR4 140 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Glipr1l1Q9DAG6 236 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 IkbipQ9DBZ1 373 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fzd5Q9EQD0 585 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tssc4Q9JHE7 317 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pias4Q9JM05 507 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tsc22d3Q9Z2S7 137 aa6.89□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp558E9Q1J0 407 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gcm2O09102 504 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 KitP05532 979 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 MyogP12979 224 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Man1a1P45700 655 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ccng1P51945 294 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ext2P70428 718 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ldb1P70662 411 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Map3k3Q61084 626 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Itga7Q61738 1179 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Xlr3bQ6P205 226 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 GnasQ6R0H7 1133 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr765Q7TRI6 309 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rnaseh2bQ80ZV0 308 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fstl5Q8BFR2 847 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cgrrf1Q8BMJ7 332 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Asb2Q8K0L0 634 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zcchc9Q8R1J3 271 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr767Q8VG33 309 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 HnrnprQ8VHM5 632 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pcdhb11Q91UZ8 797 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sp2Q9D2H6 612 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Q9D979 236 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pard6bQ9JK83 371 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hao1Q9WU19 370 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nfs1Q9Z1J3 459 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Slc25a14Q9Z2B2 325 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sec16aA2AIX1 2377 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Plxna4Q80UG2 1893 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 B020011L13RikA0A087WQI7 412 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Iqcj-Schip1A0A088MLT8 559 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Map7d3A2AEY4 876 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Itpripl1A2ASA8 547 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 GmlE9PX31 176 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm10250G3X9L6 160 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Xbp1O35426 267 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Schip1P0DPB4 484 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ptger4P32240 513 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Msh2P43247 935 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lbx1P52955 282 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 GemP55041 295 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ap2m1P84091 435 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Myo1gQ5SUA5 1024 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fam169aQ5XG69 665 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 HnrnpdQ60668 355 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pcdh8Q7TSK3 1070 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pced1bQ8BGX1 433 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfm2Q8BM13 448 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sfr1Q8BP27 319 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sumf2Q8BPG6 308 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Slc18a2Q8BRU6 517 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ccdc151Q8BSN3 593 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 McatQ8R3F5 381 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zdhhc5Q8VDZ4 715 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mrpl14Q9D1I6 145 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Atp5hQ9DCX2 161 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Shcbp1Q9Z179 668 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Bag6Q9Z1R2 1154 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gtf3c1Q8K284 2101 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ajm1A2AJA9 974 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fam151bD3YUE4 279 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Klhl3E0CZ16 587 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dpysl2O08553 572 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Banf1O54962 89 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Got2P05202 430 aaKnown RBP6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Prf1P10820 554 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 PnmtP40935 295 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Dsc3P55850 896 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Emc10Q3TAS6 258 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp607aQ3TQG9 686 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nat9Q3UG98 241 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Irf4Q64287 450 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Scd4Q6T707 353 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Defb14Q7TNV9 67 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Kctd13Q8BGV7 329 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ubap1Q8BH48 502 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nup107Q8BH74 926 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cfap61Q8CEL2 1252 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Trpm8Q8R4D5 1104 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Abcg4Q91WA9 646 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Chst15Q91XQ5 561 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Atp6v1g1Q9CR51 118 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fgfr1op2Q9CRA9 253 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tmed5Q9CXE7 229 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Anxa9Q9JHQ0 345 aa6.88□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Elovl2Q9JLJ4 292 aa6.88□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms