RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Svs2Q8BS30 375 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 ItpkaQ8R071 459 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Igsf8Q8R366 611 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Sorcs3Q8VI51 1219 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Snx7Q9CY18 387 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Dnajc18Q9CZJ9 357 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Necab3Q9D6J4 353 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Shank3Q4ACU6 1730 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Trbv4A0A075B5I2 113 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm4756A0A140LIS8 335 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Lrrc23O35125 340 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Polr1bP70700 1135 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Jak3Q62137 1100 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Cpsf6Q6NVF9 551 aaKnown RBP11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 AtminQ6P9S1 818 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Snrpb2Q9CQI7 225 aaKnown RBP11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Serpinb9bQ9DAV6 377 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 AadatQ9WVM8 425 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Htatip2Q9Z2G9 242 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Smok3cA0A087WSF2 504 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ankrd16A2AS55 361 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Bmp2P21274 394 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 PrkcgP63318 697 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Serpinb5P70124 375 aaKnown RBP11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Frg1P97376 258 aaKnown RBP11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 B3gntl1Q3U129 357 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Flot2Q60634 428 aaKnown RBP11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 PterQ60866 349 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Crls1Q80ZM8 303 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gjc2Q8BQU6 440 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Snrnp48Q9D361 337 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Mcemp1Q9D8U6 183 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm10719E9Q7T3 227 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Kpna4O35343 521 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 TfamP40630 243 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Icam5Q60625 917 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Eif2s1Q6ZWX6 315 aaKnown RBP11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Samd4bQ80XS6 687 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Slc7a4Q8BLQ7 635 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Efemp1Q8BPB5 493 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tas1r2Q925I4 843 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 2310003L06RikQ9CV82 495 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gemin6Q9CX53 166 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 CenpnQ9CZW2 337 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Mrpl17Q9D8P4 176 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Capn10Q9ESK3 666 aa11.84□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Vmn1r2A2AMT6 306 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Itga8A2ARA8 1062 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 4931406B18RikA2RSL7 367 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Kif28pD3YXS5 1028 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mkrn2osD3Z393 217 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tsga10ipF7A1F0 157 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm11236J3QMS7 360 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 CilpQ66K08 1184 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 R3hcc1lQ8BJM3 775 aaKnown RBP11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 MmaaQ8C7H1 415 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cd207Q8VBX4 331 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lars2Q8VDC0 902 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lrrc4Q99PH1 652 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 HnrnpdlQ9Z130 301 aaKnown RBP11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lactbl1S4R213 581 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Atrnl1Q6A051 1378 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Speer4cG3UXD1 256 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm10354K7N6A0 256 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ifrd1P19182 449 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Asgr1P34927 284 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Itga2Q62469 1178 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tp53inp2Q8CFU8 221 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr371Q8VGB8 312 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 AslQ91YI0 464 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Chaf1bQ9D0N7 572 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Serpinb1aQ9D154 379 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 MispQ9D279 648 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dgat2Q9DCV3 388 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lmx1aQ9JKU8 382 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Bcl10Q9Z0H7 233 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Myh7bA2AQP0 1941 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 DgkdE9PUQ8 1220 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Il4i1O09046 630 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 H2-AaP01910 256 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 H2-Q8P14430 326 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mtf2Q02395 593 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mapkapk3Q3UMW7 384 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vsx2Q61412 361 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Awat2Q6E1M8 333 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Chst10Q6PGK7 356 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sdr16c5Q7TQA3 309 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Arhgef38Q80VK6 770 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ppm1lQ8BHN0 360 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Bhlhe22Q8C6A8 355 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Asb14Q8C6Y6 587 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Zswim3Q8CFL8 695 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pycr2Q922Q4 320 aaKnown RBP11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rab30Q923S9 203 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Prdm5Q9CXE0 599 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 GatmQ9D964 423 aaKnown RBP11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mast2Q60592 1734 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Neurod4O09105 330 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Kpnb1P70168 876 aaKnown RBP11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nutm2Q3V0C3 733 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms