RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Trpv3Q8K424 791 aa18.35■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Sec16bQ91XT4 1051 aa18.35■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 LrgukQ9D5S7 820 aa18.35■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Atad1Q9D5T0 361 aa18.35■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Smpd3Q9JJY3 655 aa18.35■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Actl7aQ9QY84 440 aa18.35■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Gm21964A0A1W2P7S4 437 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 1600015I10RikE9Q745 711 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Olfr726E9Q8X3 321 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Hes2O54792 157 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 GaaP70699 953 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Olfr725Q05A45 321 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Zyg11bQ3UFS0 744 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Lsg1Q3UM18 644 aaKnown RBP18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Igfbp7Q61581 281 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Zfp90Q61967 636 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Samd4bQ80XS6 687 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Cyp2c70Q91W64 489 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 GcshQ91WK5 170 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Atoh8Q99NA2 322 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Pinx1Q9CZX5 332 aaKnown RBP18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Rsph14Q9D3W1 341 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 AcadsbQ9DBL1 432 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Vps35Q9EQH3 796 aaKnown RBP18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 NckipsdQ9ESJ4 714 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 1810010D01RikA0A1L1SR87 51 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Slfn9B1ARD6 910 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Krt4P07744 525 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 St14P56677 855 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Akr1c6P70694 323 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Slc39a4Q78IQ7 660 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 B3gnt5Q8BGY6 376 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 R3hcc1lQ8BJM3 775 aaKnown RBP18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Sec22cQ8BXT9 303 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Pi4k2bQ8CBQ5 469 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Ccdc130Q9D516 385 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Slc28a3Q9ERH8 703 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Atg2aQ6P4T0 1914 aa18.34■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 SmoktcrA2KF29 484 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Phf11A6H5X4 337 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Dthd1E9PZX1 795 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Rnf169E9Q7F2 694 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Gm21738J3QP72 227 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Galnt1O08912 559 aaKnown RBP18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Igf2bp1O88477 577 aaKnown RBP18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Zfp14P10755 501 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 AnpepP97449 966 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Nr1h2Q60644 446 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Cldn11Q60771 207 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Slc6a4Q60857 630 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Mon1aQ6PDG8 556 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Psapl1Q8C1C1 522 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Adgrf1Q8VEC3 908 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Pcdhga10Q91XY9 930 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Lrrc40Q9CRC8 602 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Rrp15Q9CYX7 281 aaKnown RBP18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Gria3Q9Z2W9 888 aa18.33■□□□□ 0.53
Ccdc3-201ENSMUST00000027988 Vmn2r-ps130A0A140T8U3 855 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 6720489N17RikA0A1Y7VJW0 127 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Gm3526E9PZM0 191 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 NadkP58058 439 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Colec11Q3SXB8 272 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Tmem252Q8C353 183 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Snrnp27Q8K194 155 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Nle1Q8VEJ4 485 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Q922M7 232 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Dnajb4Q9D832 337 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 IgtpQ9DCE9 423 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Spag4Q9JJF2 443 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 NbnQ9R207 751 aa18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Celf2Q9Z0H4 508 aaKnown RBP18.33■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Dennd4aE9Q8V6 1869 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Ssxb6A2BI74 170 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Cilp2D3Z7H8 1162 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Kpna6O35345 536 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 P01664 111 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 En2P09066 324 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Gpx3P46412 226 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Gli1P47806 1111 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 HdxQ14B70 692 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Syce1lQ5D525 247 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Cyp2c66Q5GLZ0 490 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Tfap2cQ61312 449 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Slc13a5Q67BT3 572 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Kirrel1Q80W68 789 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Usp45Q8K387 813 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 BfarQ8R079 450 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Barhl2Q8VIB5 384 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Itfg1Q99KW9 610 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Lyrm1Q9CQB7 122 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Il22Q9JJY9 179 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Epb41l4bQ9JMC8 527 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Carm1Q9WVG6 608 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Numa1E9Q7G0 2094 aaKnown RBP18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 TriobpQ99KW3 2014 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Mroh7A2AVR2 1279 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Azin1O35484 448 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 GhrP16882 650 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Pitx1P70314 315 aa18.32■□□□□ 0.52
Ccdc3-201ENSMUST00000027988 Cpne7Q0VE82 557 aa18.32■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms