RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 InvsO89019 1062 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rc3h2P0C090 1187 aaKnown RBP4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 PahP16331 453 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cap1P40124 474 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gjb4Q02738 266 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Afg1lQ3V384 480 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ctc1Q5SUQ9 1212 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Madcam1Q61826 405 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zswim6Q80TB7 1207 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Spata20Q80YT5 790 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Lamtor4Q8CF66 99 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Sumf1Q8R0F3 372 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pcdhb17Q91VD8 799 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Spef1Q99JL1 234 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Myl9Q9CQ19 172 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cops7aQ9CZ04 275 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Dnajc18Q9CZJ9 357 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Bcas2Q9D287 225 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Tmem114Q9D563 222 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mettl15Q9DCL4 406 aa4.56□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Tmsb15aA2AEH9 79 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Dpy19l4A2AJQ3 722 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Sult2a6B2RVI8 285 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Flvcr1B2RXV4 560 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Adamts14E9PX39 1209 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Spaca6E9Q8Q8 339 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm8020F6WLE9 229 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cd48P18181 240 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gbx2P48031 348 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ptpn5P54830 541 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cdo1P60334 200 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zfp935Q14DI0 353 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rhox4fQ2MDF8 205 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rhox4cQ2MDG1 205 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rnf43Q5NCP0 784 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zfp61Q923D1 555 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 NarfQ9CYQ7 462 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 2610042L04RikQ9D073 150 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rhox4aQ9D3I8 205 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Noxred1Q9D3S5 366 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Med11Q9D8C6 117 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Nrip2Q9JHR9 270 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 PnkpQ9JLV6 522 aaKnown RBP4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ube2ql1A0PJN4 161 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm5798F7BTS7 198 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Fam71e2L7N480 754 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ebf3O08791 596 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Csf1rP09581 977 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cyp2a4P15392 494 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cyp2a5P20852 494 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Kir3dl1P83555 432 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pydc3Q3V3Q4 588 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Shroom1Q5SX79 823 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cdc14bQ6PFY9 485 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Arhgef38Q80VK6 770 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Colgalt1Q8K297 617 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rps6kl1Q8R2S1 544 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Akr1d1Q8VCX1 325 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Memo1Q91VH6 297 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Psmd8Q9CX56 353 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Acbd6Q9D061 282 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Actr6Q9D864 396 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ssr3Q9DCF9 185 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 PllpQ9DCU2 182 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Nme3Q9WV85 169 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rbbp6P97868 1790 aaKnown RBP4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Hcn3O88705 779 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Crhr1P35347 415 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Elk3P41971 409 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Dsc2P55292 902 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ppp3caP63328 521 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cyb5r4Q3TDX8 528 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cbx5Q61686 191 aaKnown RBP4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pcid2Q8BFV2 399 aaKnown RBP4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Znf592Q8BHZ4 1262 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Znf410Q8BKX7 478 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mark1Q8VHJ5 795 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Kdelr1Q99JH8 212 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Trpd52l3Q9CQ14 231 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Lsm12Q9D0R8 195 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Tchhl1Q9D3P1 638 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mrpl2Q9D773 306 aaKnown RBP4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mxra8Q9DBV4 442 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Stub1Q9WUD1 304 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Trim10Q9WUH5 489 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Lactbl1S4R213 581 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Akap11E9Q777 1895 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm45861A0A1B0GRY3 1923 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Prl2c2P04095 224 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cd247P24161 164 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Akt1P31750 480 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Lrfn1Q2WF71 766 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Brms1lQ3U1T3 323 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ppp1r13lQ5I1X5 824 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zdhhc18Q5Y5T2 380 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Slc12a9Q99MR3 914 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Commd8Q9CZG3 183 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Apbb2Q9DBR4 760 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 PolhQ9JJN0 694 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Kcnq2Q9Z351 759 aa4.55□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms