RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 NIPAL4Q0D2K0 466 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 AP1B1Q10567 949 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 ZBTB17Q13105 803 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 IHHQ14623 411 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 LRRC14Q15048 493 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 LLGL1Q15334 1064 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 WSCD2Q2TBF2 565 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 CCDC50Q8IVM0 306 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 CNTD1Q8N815 330 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 WDR36Q8NI36 951 aaKnown RBP18.21■□□□□ 0.51
VPS72-207ENST00000640458 PIH1D2Q8WWB5 315 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 ANKMY1Q9P2S6 941 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 B4GALT6Q9UBX8 382 aa18.21■□□□□ 0.51
VPS72-207ENST00000640458 ATXN7L1Q9ULK2 861 aaPredicted RBP18.21■□□□□ 0.51
VPS72-207ENST00000640458 A0A0U1RQJ8 604 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 SPTY2D1-AS1A0A0U1RR47 76 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 SUV39H1O43463 412 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 ELFN1P0C7U0 828 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 CYP2A6P11509 494 aaPredicted RBP18.2■□□□□ 0.5
VPS72-207ENST00000640458 PECAM1P16284 738 aaPredicted RBP18.2■□□□□ 0.5
VPS72-207ENST00000640458 VIPR1P32241 457 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 PEX5P50542 639 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 HNRNPKP61978 463 aaKnown RBP eCLIP18.2■□□□□ 0.5
VPS72-207ENST00000640458 FZD2Q14332 565 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 IRF4Q15306 451 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 ZCCHC8Q6NZY4 707 aaKnown RBP18.2■□□□□ 0.5
VPS72-207ENST00000640458 CLEC14AQ86T13 490 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 NT5DC3Q86UY8 548 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
VPS72-207ENST00000640458 SCRN2Q96FV2 425 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 MCCC1Q96RQ3 725 aaPredicted RBP18.2■□□□□ 0.5
VPS72-207ENST00000640458 LZTFL1Q9NQ48 299 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 TRMT1Q9NXH9 659 aaKnown RBP18.2■□□□□ 0.5
VPS72-207ENST00000640458 SAE1Q9UBE0 346 aaPredicted RBP18.2■□□□□ 0.5
VPS72-207ENST00000640458 TRIM10Q9UDY6 481 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 GUCA1BQ9UMX6 200 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 TTLL3Q9Y4R7 772 aa18.2■□□□□ 0.5
VPS72-207ENST00000640458 TLN1Q9Y490 2541 aaKnown RBP18.2■□□□□ 0.5
VPS72-207ENST00000640458 MACROD2A1Z1Q3 448 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 RECQL5O94762 991 aaPredicted RBP18.19■□□□□ 0.5
VPS72-207ENST00000640458 PDHA1P08559 390 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 GM2AP17900 193 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 RWDD2BP57060 319 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 PDE1CQ14123 709 aaPredicted RBP18.19■□□□□ 0.5
VPS72-207ENST00000640458 PTK2BQ14289 1009 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 PRKD1Q15139 912 aaPredicted RBP18.19■□□□□ 0.5
VPS72-207ENST00000640458 TPRG1LQ5T0D9 272 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 XKR5Q6UX68 686 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 BBS12Q6ZW61 710 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 SYCE1Q8N0S2 351 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 NDUFAF2Q8N183 169 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 CBARPQ8N350 705 aaPredicted RBP18.19■□□□□ 0.5
VPS72-207ENST00000640458 ZNF548Q8NEK5 533 aaPredicted RBP18.19■□□□□ 0.5
VPS72-207ENST00000640458 P3H4Q92791 437 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 TDRD1Q9BXT4 1180 aaKnown RBP18.19■□□□□ 0.5
VPS72-207ENST00000640458 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 EFR3BQ9Y2G0 817 aa18.19■□□□□ 0.5
VPS72-207ENST00000640458 A8MX80 341 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 HEXIM1O94992 359 aaKnown RBP18.18■□□□□ 0.5
VPS72-207ENST00000640458 CSF2P04141 144 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 MMP2P08253 660 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 FAM87AP0C7U9 286 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 ITGB6P18564 788 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 CA4P22748 312 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 PTPN7P35236 360 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 MLLT3P42568 568 aaPredicted RBP18.18■□□□□ 0.5
VPS72-207ENST00000640458 THOP1P52888 689 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 CNGA3Q16281 694 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 DEFB133Q30KQ1 61 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 TEX44Q53QW1 395 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 USP45Q70EL2 814 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 B4GALNT4Q76KP1 1039 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 PARGQ86W56 976 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.18■□□□□ 0.5
VPS72-207ENST00000640458 TFB1MQ8WVM0 346 aaKnown RBP18.18■□□□□ 0.5
VPS72-207ENST00000640458 SGF29Q96ES7 293 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 COQ10AQ96MF6 247 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 ALS2CR12Q96Q35 445 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 SYNDIG1Q9H7V2 258 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 KCND1Q9NSA2 647 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 NCKIPSDQ9NZQ3 722 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 RP1P56715 2156 aa18.18■□□□□ 0.5
VPS72-207ENST00000640458 COL27A1Q8IZC6 1860 aaPredicted RBP18.18■□□□□ 0.5
VPS72-207ENST00000640458 CCDC187A0A096LP49 1063 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 A0A0J9YYE9 177 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 EME2A4GXA9 379 aaPredicted RBP18.17■□□□□ 0.5
VPS72-207ENST00000640458 NPIPB15A6NHN6 443 aaPredicted RBP18.17■□□□□ 0.5
VPS72-207ENST00000640458 PSMD11O00231 422 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 CASC3O15234 703 aaKnown RBP18.17■□□□□ 0.5
VPS72-207ENST00000640458 TCEA3O75764 348 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 PRLP01236 227 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 TRBC1P01850 177 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 ITGA2BP08514 1039 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 NME1P15531 152 aaKnown RBP18.17■□□□□ 0.5
VPS72-207ENST00000640458 CTPS1P17812 591 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 LHCGRP22888 699 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 CD86P42081 329 aa18.17■□□□□ 0.5
VPS72-207ENST00000640458 RPL26P61254 145 aaKnown RBP18.17■□□□□ 0.5
VPS72-207ENST00000640458 EIF2B5Q13144 721 aaKnown RBP18.17■□□□□ 0.5
VPS72-207ENST00000640458 MTM1Q13496 603 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms