RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 PAF1Q8N7H5 531 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 PTCD2Q8WV60 388 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 HSPBAP1Q96EW2 488 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 IMP4Q96G21 291 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 SMOC2Q9H3U7 446 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 BPIFA1Q9NP55 256 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 TMEM181Q9P2C4 612 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 ANKRD33BA6NCL7 494 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 RAMP2O60895 175 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 CYP2C18P33260 490 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 RPL26P61254 145 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 RBBP7Q16576 425 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 EFHBQ8N7U6 833 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 MIPOL1Q8TD10 442 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 SERPINB11Q96P15 392 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 ZYG11BQ9C0D3 744 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 PNPLA3Q9NST1 481 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 HSFX1Q9UBD0 423 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 EBF1Q9UH73 591 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 SLC12A8A0AV02 714 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 HAS3O00219 553 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 GPX3P22352 226 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 SCNN1BP51168 640 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 SH3BGRP55822 239 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-221ENST00000640341 APOFQ13790 326 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 NEDD8Q15843 81 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 TMEM259Q4ZIN3 620 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 MS4A13Q5J8X5 152 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 FBXL22Q6P050 247 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 PGBD5Q8N414 524 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 FIBCD1Q8N539 461 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 DTNBP1Q96EV8 351 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 TEX37Q96LM6 180 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 TCF12Q99081 682 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 CD300AQ9UGN4 299 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 CDC7O00311 574 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 BTN3A1O00481 513 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 EI24O14681 340 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 GIPC1O14908 333 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 KPNA6O60684 536 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 CD1DP15813 335 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF23P17027 643 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 CDKN1CP49918 316 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-221ENST00000640341 INPP5AQ14642 412 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 RALGPS2Q86X27 583 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-221ENST00000640341 FBXO39Q8N4B4 442 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 TUBB1Q9H4B7 451 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 CLK4Q9HAZ1 481 aaKnown RBP14.56□□□□□ -0.08
SCARB2-221ENST00000640341 POLG2Q9UHN1 485 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 EVLQ9UI08 416 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-221ENST00000640341 CDC14AQ9UNH5 594 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 TCRBV3S1A0A5B6 114 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 MUSKO15146 869 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 GPR39O43194 453 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 FASP25445 335 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 ESRRGP62508 458 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 HPCAP84074 193 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 MRNIPQ6NTE8 343 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 TMEM126BQ8IUX1 230 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 CMTM6Q9NX76 183 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 THEGQ9P2T0 379 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 GIT1Q9Y2X7 761 aa14.56□□□□□ -0.08
SCARB2-221ENST00000640341 H3BNH8 94 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 RPL9P32969 192 aaKnown RBP14.55□□□□□ -0.08
SCARB2-221ENST00000640341 POLD2P49005 469 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 ADARP55265 1226 aaKnown RBP14.55□□□□□ -0.08
SCARB2-221ENST00000640341 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
SCARB2-221ENST00000640341 FAM45BPQ6NSW5 357 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 GPR141Q7Z602 305 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF280BQ86YH2 543 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 NAT16Q8N8M0 369 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 KLHDC9Q8NEP7 349 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 FAM45AQ8TCE6 357 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 MYEOVQ96EZ4 313 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 SEPT5Q99719 369 aaPredicted RBP14.55□□□□□ -0.08
SCARB2-221ENST00000640341 SLC2A11Q9BYW1 496 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 EPB41L1Q9H4G0 881 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 TDRKHQ9Y2W6 561 aaKnown RBP14.55□□□□□ -0.08
SCARB2-221ENST00000640341 A0A0D9SEW6 157 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 NPEPPSL1A6NEC2 478 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 LDB2O43679 373 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 CELF2O95319 508 aaKnown RBP14.55□□□□□ -0.08
SCARB2-221ENST00000640341 IGLV3-25P01717 112 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 MMP2P08253 660 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 LBPP18428 481 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 C16orf72Q14CZ0 275 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 GPR162Q16538 588 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 CARM1Q86X55 608 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 CMTR2Q8IYT2 770 aaKnown RBP14.55□□□□□ -0.08
SCARB2-221ENST00000640341 CDYL2Q8N8U2 506 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 RNF145Q96MT1 663 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 ADI1Q9BV57 179 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 CATSPERZQ9NTU4 200 aa14.55□□□□□ -0.08
SCARB2-221ENST00000640341 DUS2Q9NX74 493 aaKnown RBP14.55□□□□□ -0.08
SCARB2-221ENST00000640341 ARPC2O15144 300 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 GPR182O15218 404 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 CLOCKO15516 846 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 SLC7A4O43246 635 aa14.54□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF37AP17032 561 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-221ENST00000640341 KCNK10P57789 538 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms