RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 TMTC1Q8IUR5 882 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 PDILTQ8N807 584 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 KBTBD7Q8WVZ9 684 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 RND1Q92730 232 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 TAF4BQ92750 862 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 HDAC10Q969S8 669 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 PLD4Q96BZ4 506 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 VPS50Q96JG6 964 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 LMLNQ96KR4 655 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 GBP5Q96PP8 586 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 LXNQ9BS40 222 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 ESYT1Q9BSJ8 1104 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 NDC1Q9BTX1 674 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 SPATA9Q9BWV2 254 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 TRIM7Q9C029 511 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 CEP44Q9C0F1 390 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 CUEDC2Q9H467 287 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 SNX7Q9UNH6 387 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 DYRK1BQ9Y463 629 aa3.47□□□□□ -1.85
CCDC7-213ENST00000639290 SMCO2A6NFE2 343 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 EREGO14944 169 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 IRAK2O43187 625 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 STC2O76061 302 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 SERPINC1P01008 464 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 IRF1P10914 325 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 HTR1BP28222 390 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 ALDH4A1P30038 563 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 GSK3AP49840 483 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 C1orf61Q13536 156 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 PPP2R5EQ16537 467 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 MCMDC2Q4G0Z9 681 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 MDH1BQ5I0G3 518 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 WIPI1Q5MNZ9 446 aaPredicted RBP3.46□□□□□ -1.85
CCDC7-213ENST00000639290 FIGLAQ6QHK4 219 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 HEATR3Q7Z4Q2 680 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 ZBTB46Q86UZ6 589 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 ARHGAP12Q8IWW6 846 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 STK40Q8N2I9 435 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 C19orf47Q8N9M1 422 aaKnown RBP3.46□□□□□ -1.85
CCDC7-213ENST00000639290 ETNPPLQ8TBG4 499 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 RAB7BQ96AH8 199 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 PPP1R16AQ96I34 528 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 IFT74Q96LB3 600 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 CCDC43Q96MW1 224 aaKnown RBP3.46□□□□□ -1.85
CCDC7-213ENST00000639290 KLF6Q99612 283 aaPredicted RBP3.46□□□□□ -1.85
CCDC7-213ENST00000639290 SMOQ99835 787 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 CTRCQ99895 268 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 DDX50Q9BQ39 737 aaKnown RBP3.46□□□□□ -1.85
CCDC7-213ENST00000639290 PYM1Q9BRP8 204 aaKnown RBP3.46□□□□□ -1.85
CCDC7-213ENST00000639290 REG4Q9BYZ8 158 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 SLITRK2Q9H156 845 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 MMP27Q9H306 513 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 ASB7Q9H672 318 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 ZFYVE1Q9HBF4 777 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 WASH6PQ9NQA3 447 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 GDAP2Q9NXN4 497 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 TCFL5Q9UL49 500 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 ZFR2Q9UPR6 939 aaKnown RBP3.46□□□□□ -1.85
CCDC7-213ENST00000639290 HRH3Q9Y5N1 445 aa3.46□□□□□ -1.85
CCDC7-213ENST00000639290 POM121BA6NF01 834 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 SYT5O00445 386 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 LIASO43766 372 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 TOM1L1O75674 476 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 PALMO75781 387 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 RASAL1O95294 804 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 EPXP11678 715 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 ZNF28P17035 718 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 ITGA2P17301 1181 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 TFE3P19532 575 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 HTR3AP46098 478 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 RPS26P62854 115 aaKnown RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 SORDQ00796 357 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 ITKQ08881 620 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 FILIP1LQ4L180 1135 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 RNF219Q5W0B1 726 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 CCDC70Q6NSX1 233 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 TIGD7Q6NT04 549 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 DTHD1Q6ZMT9 781 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 RIPOR1Q6ZS17 1223 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 LIMS2Q7Z4I7 341 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 MILR1Q7Z6M3 343 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 LSRQ86X29 649 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 PPP1R3BQ86XI6 285 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 SLC13A5Q86YT5 568 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 RASGRP3Q8IV61 690 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 TRIM42Q8IWZ5 723 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 SEMA6DQ8NFY4 1073 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 DDI1Q8WTU0 396 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 KIFAP3Q92845 792 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 GCDHQ92947 438 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 SH3KBP1Q96B97 665 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 ZNF837Q96EG3 531 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 CCDC114Q96M63 670 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 TAAR6Q96RI8 345 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 TCEAL2Q9H3H9 227 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-213ENST00000639290 PTGFRNQ9P2B2 879 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 B4GALT7Q9UBV7 327 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 ZNF180Q9UJW8 692 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 IKZF3Q9UKT9 509 aa3.46□□□□□ -1.86
CCDC7-213ENST00000639290 RNF6Q9Y252 685 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms