RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 RINLQ6ZS11 566 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 APOLD1Q96LR9 279 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 RTKNQ9BST9 563 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ATG10Q9H0Y0 220 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 STK39Q9UEW8 545 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 FKBPLQ9UIM3 349 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 SCN11AQ9UI33 1791 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 INSIG1O15503 277 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 MAP3K13O43283 966 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 F2P00734 622 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 IGFBP4P22692 258 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 CHN2P52757 468 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 LSM12Q3MHD2 195 aaKnown RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 VPS26BQ4G0F5 336 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 PQLC1Q8N2U9 271 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ZMAT2Q96NC0 199 aaKnown RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 APOL4Q9BPW4 351 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 XYLT2Q9H1B5 865 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ZNF395Q9H8N7 513 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 SSU72Q9NP77 194 aaKnown RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 RFXANKO14593 260 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 LAG3P18627 525 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 NOVP48745 357 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 SLC10A7Q0GE19 358 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 CES5AQ6NT32 575 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ZC3H7AQ8IWR0 971 aaKnown RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 PROX1Q92786 737 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 TAS2R1Q9NYW7 299 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 CAPN8A6NHC0 703 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 H0Y858 1186 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 UBXN8O00124 270 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ARHGEF9O43307 516 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 TIPRLO75663 272 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 HTR7P34969 479 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 SLC1A2P43004 574 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 HSPA7P48741 367 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 CXCR3P49682 368 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 TSNQ15631 228 aaKnown RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 MPPE1Q53F39 396 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ATXN7L2Q5T6C5 722 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ZCCHC8Q6NZY4 707 aaKnown RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ZYG11AQ6WRX3 759 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 CPNE9Q8IYJ1 553 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 TWIST2Q8WVJ9 160 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 NTAN1Q96AB6 310 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 ZFRQ96KR1 1074 aaKnown RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 GPR88Q9GZN0 384 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 RPL26L1Q9UNX3 145 aaKnown RBP14.32□□□□□ -0.12
SCARB2-208ENST00000638372 NCKAP1Q9Y2A7 1128 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 MFHAS1Q9Y4C4 1052 aa14.32□□□□□ -0.12
SCARB2-208ENST00000638372 A0A0U1RQF3 1178 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CARNS1A5YM72 827 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 C1QTNF3-AMACRE9PGA6 284 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 SNUPNO95149 360 aaKnown RBP14.31□□□□□ -0.12
SCARB2-208ENST00000638372 EIF2S1P05198 315 aaKnown RBP14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CHRNGP07510 517 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 TNNI3P19429 210 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 GPX6P59796 221 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 C16orf72Q14CZ0 275 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 NCF4Q15080 339 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 ZNF792Q3KQV3 632 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 BPIFB6Q8NFQ5 453 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 WDR48Q8TAF3 677 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CNTN3Q9P232 1028 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 AP4B1Q9Y6B7 739 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 U3KQV3 271 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 DLGAP3O95886 979 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 MT-ND1P03886 318 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 NDST2P52849 883 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CDH4P55283 916 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 RALGPS1Q5JS13 557 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 METTL21CQ5VZV1 264 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 ZNF549Q6P9A3 640 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 PLEKHM3Q6ZWE6 761 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCARB2-208ENST00000638372 SETD9Q8NE22 299 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 STARD8Q92502 1023 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CD101Q93033 1021 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 FUBP3Q96I24 572 aaKnown RBP eCLIP14.31□□□□□ -0.122e-22■■■■■ 55.4
SCARB2-208ENST00000638372 PEBP4Q96S96 227 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 ATAD3AQ9NVI7 634 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CDH22Q9UJ99 828 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 PABPC1P11940 636 aaKnown RBP14.31□□□□□ -0.12
SCARB2-208ENST00000638372 WASP42768 502 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CREMQ03060 361 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 IL10RBQ08334 325 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 KHDC1Q4VXA5 237 aaKnown RBP14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CYP20A1Q6UW02 462 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 KIAA1324Q6UXG2 1013 aaKnown RBP14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CASP12Q6UXS9 341 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 ZBTB46Q86UZ6 589 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 C2orf73Q8N5S3 287 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-208ENST00000638372 FAM156AQ8NDB6 213 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 EPS8L2Q9H6S3 715 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 NOL11Q9H8H0 719 aaKnown RBP14.31□□□□□ -0.12
SCARB2-208ENST00000638372 IPPKQ9H8X2 491 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 CD84Q9UIB8 345 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 KIF13AQ9H1H9 1805 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 OR2AG2A6NM03 316 aa14.31□□□□□ -0.12
SCARB2-208ENST00000638372 ERAL1O75616 437 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms