RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 LYPLA1O75608 230 aaPredicted RBP11.52□□□□□ -0.57
CLN6-217ENST00000636964 SERPINF2P08697 491 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 GLRBP48167 497 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 FRG1Q14331 258 aaKnown RBP11.52□□□□□ -0.57
CLN6-217ENST00000636964 PTPRRQ15256 657 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 TSTD2Q5T7W7 516 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 CNSTQ6PJW8 725 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 RBM44Q6ZP01 1051 aaKnown RBP11.52□□□□□ -0.57
CLN6-217ENST00000636964 NET1Q7Z628 596 aaPredicted RBP11.52□□□□□ -0.57
CLN6-217ENST00000636964 C10orf107Q8IVU9 208 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 PDCD6IPQ8WUM4 868 aaKnown RBP11.52□□□□□ -0.57
CLN6-217ENST00000636964 PYDC1Q8WXC3 89 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 HDAC10Q969S8 669 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 SIRPGQ9P1W8 387 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 CIDEBQ9UHD4 219 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 PCDHGC4Q9Y5F7 938 aa11.52□□□□□ -0.57
CLN6-217ENST00000636964 A0A0U1RQS6 177 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 LOC285095A0A1B0GVY8 99 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 ILVBLA1L0T0 632 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 RFPL2O75678 378 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 PAMP19021 973 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 DNAJB1P25685 340 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 PPP3CCP48454 512 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 HTRA4P83105 476 aaPredicted RBP11.51□□□□□ -0.57
CLN6-217ENST00000636964 FPGSQ05932 587 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 CYTH1Q15438 398 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 KYAT3Q6YP21 454 aaKnown RBP11.51□□□□□ -0.57
CLN6-217ENST00000636964 SCUBE1Q8IWY4 988 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 LILRB2Q8N423 598 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 OR13J1Q8NGT2 312 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 MRPS31Q92665 395 aaKnown RBP11.51□□□□□ -0.57
CLN6-217ENST00000636964 ABTB1Q969K4 478 aaPredicted RBP11.51□□□□□ -0.57
CLN6-217ENST00000636964 MCMBPQ9BTE3 642 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 TRIM55Q9BYV6 548 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 NDEL1Q9GZM8 345 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 RHOJQ9H4E5 214 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 EPB41L1Q9H4G0 881 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 PTTG2Q9NZH5 202 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 CFAP97Q9P2B7 532 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 SEPT3Q9UH03 358 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 FBXO5Q9UKT4 447 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 HEMK1Q9Y5R4 338 aaPredicted RBP11.51□□□□□ -0.57
CLN6-217ENST00000636964 XIRP2A4UGR9 3374 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 MYOCOSA0A1B0GUC4 107 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 ITM2AO43736 263 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 TLL1O43897 1013 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 GREM1O60565 184 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 TM7SF2O76062 418 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 PROCP04070 461 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 ENO1P06733 434 aaKnown RBP11.51□□□□□ -0.57
CLN6-217ENST00000636964 MYL2P10916 166 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 PEX2P28328 305 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 CTNNB1P35222 781 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 ARF5P84085 180 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 PCLAFQ15004 111 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 LILRA6Q6PI73 481 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 CEP97Q8IW35 865 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 ESX1Q8N693 406 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 DDI1Q8WTU0 396 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 TADA1Q96BN2 335 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 RMDN1Q96DB5 314 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 ELMO2Q96JJ3 720 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 TBATAQ96M53 351 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 VPS28Q9UK41 221 aa11.51□□□□□ -0.57
CLN6-217ENST00000636964 TDRKHQ9Y2W6 561 aaKnown RBP11.51□□□□□ -0.57
CLN6-217ENST00000636964 VCLP18206 1134 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 STX3Q13277 289 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 ARID3BQ8IVW6 561 aaPredicted RBP11.5□□□□□ -0.57
CLN6-217ENST00000636964 BBS7Q8IWZ6 715 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 BBS5Q8N3I7 341 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 OR13C4Q8NGS5 318 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 ANKRD49Q8WVL7 239 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 GPR22Q99680 433 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 THTPAQ9BU02 230 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 TLK1Q9UKI8 766 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 CLEC4EQ9ULY5 219 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 FAM95CA0A1B0GW59 222 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 LDB2O43679 373 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 MT-CO1P00395 513 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 ADH1AP07327 375 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 IDO1P14902 403 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 UQCRBP14927 111 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 MYOGP15173 224 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 CCR2P41597 374 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 PRAMEP78395 509 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 PPIGQ13427 754 aaKnown RBP eCLIP11.5□□□□□ -0.577e-7■□□□□ 9.4
CLN6-217ENST00000636964 CDH18Q13634 790 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 RBM20Q5T481 1227 aaKnown RBP11.5□□□□□ -0.57
CLN6-217ENST00000636964 ATG16L1Q676U5 607 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 KIAA0930Q6ICG6 404 aaPredicted RBP11.5□□□□□ -0.57
CLN6-217ENST00000636964 SETD3Q86TU7 594 aaPredicted RBP11.5□□□□□ -0.57
CLN6-217ENST00000636964 TMC8Q8IU68 726 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 C7orf61Q8IZ16 206 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 LILRB1Q8NHL6 650 aaPredicted RBP11.5□□□□□ -0.57
CLN6-217ENST00000636964 PTCD2Q8WV60 388 aaKnown RBP11.5□□□□□ -0.57
CLN6-217ENST00000636964 ZNF599Q96NL3 588 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 PSKH2Q96QS6 385 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 MGME1Q9BQP7 344 aa11.5□□□□□ -0.57
CLN6-217ENST00000636964 ACE2Q9BYF1 805 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms