RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CREG2Q8IUH2 290 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 SCAMP4Q969E2 229 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 EID2BQ96D98 161 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 C16orf45Q96MC5 204 aaPredicted RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 RIOK2Q9BVS4 552 aaKnown RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 CDH19Q9H159 772 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 FAM83DQ9H4H8 585 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 ARNT2Q9HBZ2 717 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 PHPT1Q9NRX4 125 aaPredicted RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 DNAJC28Q9NX36 388 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 RNF14Q9UBS8 474 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 ASCC3Q8N3C0 2202 aaKnown RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 MYLKQ15746 1914 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 H3BM21 787 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 PDE2AO00408 941 aaPredicted RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 PCDHGA12O60330 932 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 GAS8O95995 478 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 APRTP07741 180 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 HOXC4P09017 264 aaPredicted RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 MYCLP1P12525 358 aaPredicted RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 KELP23276 732 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 KIAA1024LP59773 190 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 DCDC1P59894 354 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 BASP1P80723 227 aaKnown RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 IL9RQ01113 521 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 SUZ12Q15022 739 aaKnown RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 HENMT1Q5T8I9 393 aaKnown RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 NYAP1Q6ZVC0 841 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 PELI3Q8N2H9 469 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 TTC30BQ8N4P2 665 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 FUBP1Q96AE4 644 aaKnown RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 WDR92Q96MX6 357 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 RTKNQ9BST9 563 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 NFKBIL1Q9UBC1 381 aaPredicted RBP15.43■□□□□ 0.06
CLN6-211ENST00000635754 PKP3Q9Y446 797 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 PCDHGB2Q9Y5G2 931 aa15.43■□□□□ 0.06
CLN6-211ENST00000635754 LRP4O75096 1905 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 ZNF106Q9H2Y7 1883 aaKnown RBP15.42■□□□□ 0.06
CLN6-211ENST00000635754 CABIN1Q9Y6J0 2220 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 C2orf81A6NN90 581 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 CRTAMO95727 393 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 KRT14P02533 472 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 EPHA8P29322 1005 aaPredicted RBP15.42■□□□□ 0.06
CLN6-211ENST00000635754 HNRNPKP61978 463 aaKnown RBP eCLIP15.42■□□□□ 0.06
CLN6-211ENST00000635754 CDK3Q00526 305 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 PDE1BQ01064 536 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 TAF1AQ15573 450 aaPredicted RBP15.42■□□□□ 0.06
CLN6-211ENST00000635754 TRIP13Q15645 432 aaPredicted RBP15.42■□□□□ 0.06
CLN6-211ENST00000635754 INAVAQ3KP66 663 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 ZDHHC20Q5W0Z9 365 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 ALS2CLQ60I27 953 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 DENND5AQ6IQ26 1287 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 ENPP7Q6UWV6 458 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 ADAMTSL4Q6UY14 1074 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 PPP1R21Q6ZMI0 780 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 BRSK1Q8TDC3 778 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 ZSCAN5AQ9BUG6 496 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 TEX101Q9BY14 249 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 BPIFA1Q9NP55 256 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.42■□□□□ 0.06
CLN6-211ENST00000635754 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.42■□□□□ 0.06
CLN6-211ENST00000635754 KLQ9UEF7 1012 aa15.42■□□□□ 0.06
CLN6-211ENST00000635754 TDRD6O60522 2096 aaKnown RBP15.42■□□□□ 0.06
CLN6-211ENST00000635754 SPTBN4Q9H254 2564 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 FLRT2O43155 660 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 PPFIA2O75334 1257 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 SUN1O94901 812 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 ECEL1O95672 775 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 SOD1P00441 154 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 CSF2P04141 144 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 CD59P13987 128 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 NME1P15531 152 aaKnown RBP15.41■□□□□ 0.06
CLN6-211ENST00000635754 JUNDP17535 347 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 VPS41P49754 854 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 BLKP51451 505 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 PPARDQ03181 441 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 CDH17Q12864 832 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 EIF2B5Q13144 721 aaKnown RBP15.41■□□□□ 0.06
CLN6-211ENST00000635754 SHBQ15464 509 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 ZNF542PQ5EBM4 170 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 DNAAF3Q8N9W5 541 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 GPR26Q8NDV2 337 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 OR56A4Q8NGH8 313 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 BTN2A2Q8WVV5 523 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 PLEKHG4BQ96PX9 1271 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 AGAP2Q99490 1192 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 LGR4Q9BXB1 951 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 SPATA16Q9BXB7 569 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 DDX47Q9H0S4 455 aaKnown RBP15.41■□□□□ 0.06
CLN6-211ENST00000635754 EIF2B3Q9NR50 452 aaKnown RBP15.41■□□□□ 0.06
CLN6-211ENST00000635754 DLL3Q9NYJ7 618 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 IL17CQ9P0M4 197 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 ARL5AQ9Y689 179 aa15.41■□□□□ 0.06
CLN6-211ENST00000635754 CCDC188H7C350 402 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 STX7O15400 261 aaKnown RBP15.4■□□□□ 0.06
CLN6-211ENST00000635754 SDC3O75056 442 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 BPIP17213 487 aa15.4■□□□□ 0.06
CLN6-211ENST00000635754 LPOP22079 712 aaPredicted RBP15.4■□□□□ 0.06
CLN6-211ENST00000635754 SRP54P61011 504 aaKnown RBP15.4■□□□□ 0.06
CLN6-211ENST00000635754 BNIP3Q12983 259 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms