RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 OR52K1Q8NGK4 314 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 DTD2Q96FN9 168 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 COQ10AQ96MF6 247 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 TM7SF3Q9NS93 570 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 PIH1D1Q9NWS0 290 aaKnown RBP14.69□□□□□ -0.06
PNKP-221ENST00000627317 KCTD5Q9NXV2 234 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 PCOLCE2Q9UKZ9 415 aa14.69□□□□□ -0.06
PNKP-221ENST00000627317 LRRK1Q38SD2 2015 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 SPAARA0A1B0GVQ0 90 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 FPGTO14772 594 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 RAD51BO15315 384 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 RAD51CO43502 376 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 PCDHGA12O60330 932 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 CD38P28907 300 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 ETV3P41162 512 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 MAGEA6P43360 314 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 NXPH1P58417 271 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 MRPS25P82663 173 aaKnown RBP14.68□□□□□ -0.06
PNKP-221ENST00000627317 STAT4Q14765 748 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 LRRC14Q15048 493 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 IRF4Q15306 451 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 IZUMO3Q5VZ72 239 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 C8orf74Q6P047 294 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 Q6ZVL8 140 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 PPIL6Q8IXY8 311 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 CPT1BQ92523 772 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 LENG8Q96PV6 779 aaPredicted RBP14.68□□□□□ -0.06
PNKP-221ENST00000627317 TRIM31Q9BZY9 425 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 SLC32A1Q9H598 525 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 CASS4Q9NQ75 786 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 RAD18Q9NS91 495 aa14.68□□□□□ -0.06
PNKP-221ENST00000627317 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.68□□□□□ -0.06
PNKP-221ENST00000627317 WDFY3Q8IZQ1 3526 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 USP24Q9UPU5 2620 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 DOCK9Q9BZ29 2069 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 TPRP12270 2363 aaKnown RBP14.67□□□□□ -0.06
PNKP-221ENST00000627317 A0A1B0GTQ1 180 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 TCRBV7S3A2A0A539 114 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 C2orf81A6NN90 581 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 EFCAB8A8MWE9 144 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 AP3B1O00203 1094 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 DNALI1O14645 258 aaPredicted RBP14.67□□□□□ -0.06
PNKP-221ENST00000627317 AURKAO14965 403 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 TMEM63AO94886 807 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 CRTAMO95727 393 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 PCCBP05166 539 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 TPH1P17752 444 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 IGFALSP35858 605 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 GRIA1P42261 906 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 SPINT3P49223 89 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 CLDN2P57739 230 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 PDE1BQ01064 536 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 PTSQ03393 145 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 POU6F1Q14863 301 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 AGERQ15109 404 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 TAF1AQ15573 450 aaPredicted RBP14.67□□□□□ -0.06
PNKP-221ENST00000627317 CDKN3Q16667 212 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 WSCD2Q2TBF2 565 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 ANKRD22Q5VYY1 191 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 TMC3Q7Z5M5 1100 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 PTAR1Q7Z6K3 402 aaPredicted RBP14.67□□□□□ -0.06
PNKP-221ENST00000627317 PCGF5Q86SE9 256 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 GLRX5Q86SX6 157 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 IQCHQ86VS3 1027 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 SPATS2Q86XZ4 545 aaKnown RBP14.67□□□□□ -0.06
PNKP-221ENST00000627317 RAVER1Q8IY67 606 aaKnown RBP14.67□□□□□ -0.06
PNKP-221ENST00000627317 TTC30BQ8N4P2 665 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 MFSD2AQ8NA29 543 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 TP53I13Q8NBR0 393 aaPredicted RBP14.67□□□□□ -0.06
PNKP-221ENST00000627317 BRSK1Q8TDC3 778 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 SNF8Q96H20 258 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 CA5BQ9Y2D0 317 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 BTBD3Q9Y2F9 522 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 PKP3Q9Y446 797 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 ARL5AQ9Y689 179 aa14.67□□□□□ -0.06
PNKP-221ENST00000627317 KMT2BQ9UMN6 2715 aaPredicted RBP14.67□□□□□ -0.06
PNKP-221ENST00000627317 RGSL1A5PLK6 1076 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 A6NNZ2 444 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 TLR4O00206 839 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 NDC80O14777 642 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 STX7O15400 261 aaKnown RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 FLRT2O43155 660 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 GM2AP17900 193 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 LPOP22079 712 aaPredicted RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 HMGCLP35914 325 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 CCT8P50990 548 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 C21orf59P57076 290 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 SESN2P58004 480 aaPredicted RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 SIM1P81133 766 aaPredicted RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 OVGP1Q12889 678 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 RNASEH2BQ5TBB1 312 aaKnown RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 ALS2CLQ60I27 953 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 KYAT3Q6YP21 454 aaKnown RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 GCNT7Q6ZNI0 430 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 RFLNAQ6ZTI6 216 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 ZNF765Q7L2R6 523 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 TECPR1Q7Z6L1 1165 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 NRSN1Q8IZ57 195 aa14.66□□□□□ -0.06
PNKP-221ENST00000627317 CBARPQ8N350 705 aaPredicted RBP14.66□□□□□ -0.06
PNKP-221ENST00000627317 SKA1Q96BD8 255 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms