RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 KLHL35Q6PF15 583 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 GALNT5Q7Z7M9 940 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 DEPDC4Q8N2C3 294 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 P2RX7Q99572 595 aaKnown RBP17.68■□□□□ 0.42
FARP1-242ENST00000627049 HOXC6P09630 235 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 ITGA1P56199 1179 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 DNAJB3Q8WWF6 145 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 SELENOMQ8WWX9 145 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 OR52E6Q96RD3 313 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 SLC39A3Q9BRY0 314 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 TDRD1Q9BXT4 1180 aaKnown RBP17.68■□□□□ 0.42
FARP1-242ENST00000627049 TLL2Q9Y6L7 1015 aa17.68■□□□□ 0.42
FARP1-242ENST00000627049 C4AP0C0L4 1744 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 C4BP0C0L5 1744 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 DPYSL4O14531 572 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 PIP5K1BO14986 540 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 DLX3O60479 287 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 OTCP00480 354 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 ABCB1P08183 1280 aaPredicted RBP17.67■□□□□ 0.42
FARP1-242ENST00000627049 CDC42P60953 191 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 SIX5Q8N196 739 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 STK40Q8N2I9 435 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 PRICKLE1Q96MT3 831 aaPredicted RBP17.67■□□□□ 0.42
FARP1-242ENST00000627049 COLEC11Q9BWP8 271 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 PSAT1Q9Y617 370 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 SESN1Q9Y6P5 492 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 TMEM233B4DJY2 109 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 H3BN98 237 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 CNTN1Q12860 1018 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 PHKG1Q16816 387 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 MTFMTQ96DP5 389 aaKnown RBP17.67■□□□□ 0.42
FARP1-242ENST00000627049 SEMA3CQ99985 751 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 KCNK13Q9HB14 408 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 HMGXB4Q9UGU5 601 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 KLHL20Q9Y2M5 609 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 BOLA2-SMG1P6H3BVE0 249 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 SNNO75324 88 aaPredicted RBP17.67■□□□□ 0.42
FARP1-242ENST00000627049 PTF1AQ7RTS3 328 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 CDH24Q86UP0 819 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 KBTBD6Q86V97 674 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 SYT12Q8IV01 421 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 TRPV3Q8NET8 790 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 BIRC8Q96P09 236 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 RASSF1Q9NS23 344 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 FZD10Q9ULW2 581 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 POLR3HQ9Y535 204 aaPredicted RBP17.67■□□□□ 0.42
FARP1-242ENST00000627049 RNASEH2AO75792 299 aaKnown RBP17.67■□□□□ 0.42
FARP1-242ENST00000627049 ALDH4A1P30038 563 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 BCAP31P51572 246 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 NFE2Q16621 373 aaPredicted RBP17.67■□□□□ 0.42
FARP1-242ENST00000627049 ARMCX6Q7L4S7 300 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 TLK2Q86UE8 772 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 OR4L1Q8NH43 312 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 ZDHHC7Q9NXF8 308 aa17.67■□□□□ 0.42
FARP1-242ENST00000627049 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.67■□□□□ 0.42
FARP1-242ENST00000627049 LAMA4Q16363 1823 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 ALDOAP04075 364 aaKnown RBP17.66■□□□□ 0.42
FARP1-242ENST00000627049 TFPTP0C1Z6 253 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 MTHFD1P11586 935 aaKnown RBP17.66■□□□□ 0.42
FARP1-242ENST00000627049 STT3AP46977 705 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 RHOAP61586 193 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 LCP2Q13094 533 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 DCLRE1AQ6PJP8 1040 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 GLT1D1Q96MS3 346 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 CLEC4MQ9H2X3 399 aaPredicted RBP17.66■□□□□ 0.42
FARP1-242ENST00000627049 FBXO44Q9H4M3 255 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 UXTQ9UBK9 157 aaPredicted RBP17.66■□□□□ 0.42
FARP1-242ENST00000627049 CRYBG1Q9Y4K1 1723 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 ZNF99A8MXY4 864 aaPredicted RBP17.66■□□□□ 0.42
FARP1-242ENST00000627049 ARIH2O95376 493 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 PIRTP0C851 137 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 CLCQ05315 142 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 HSDL1Q3SXM5 330 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 NCBP2-AS2Q69YL0 99 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 TMCC2O75069 709 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 CLPXO76031 633 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 DAG1Q14118 895 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 MZT2BQ6NZ67 158 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 ELOVL7A1L3X0 281 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 H3BNH8 94 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 UBXN8O00124 270 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 TFECO14948 347 aaPredicted RBP17.66■□□□□ 0.42
FARP1-242ENST00000627049 OLR1P78380 273 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 RBM48Q5RL73 367 aaKnown RBP17.66■□□□□ 0.42
FARP1-242ENST00000627049 AFTPHQ6ULP2 937 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 RIOX2Q8IUF8 465 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 TWNKQ96RR1 684 aa17.66■□□□□ 0.42
FARP1-242ENST00000627049 SLC28A1O00337 649 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 ARPC2O15144 300 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 CDH5P33151 784 aaPredicted RBP17.65■□□□□ 0.42
FARP1-242ENST00000627049 TTPAP49638 278 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 QPRTQ15274 297 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 SVOPLQ8N434 492 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 USP29Q9HBJ7 922 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 DERAQ9Y315 318 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 PIPSLA2A3N6 862 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 LRIG2O94898 1065 aa17.65■□□□□ 0.42
FARP1-242ENST00000627049 MT-CYBP00156 380 aaPredicted RBP17.65■□□□□ 0.42
FARP1-242ENST00000627049 F7P08709 466 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms