RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SRP54P61011 504 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 SIM1P81133 766 aaPredicted RBP13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 CDK3Q00526 305 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 IL9RQ01113 521 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 LAMB3Q13751 1172 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 OASLQ15646 514 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 CDKN3Q16667 212 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 LONRF2Q1L5Z9 754 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 SIRPB2Q5JXA9 342 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 ZCCHC8Q6NZY4 707 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 ENPP7Q6UWV6 458 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 KANSL1Q7Z3B3 1105 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 TMC3Q7Z5M5 1100 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 HEATR4Q86WZ0 1026 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 FAM181AQ8N9Y4 354 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 ZNF548Q8NEK5 533 aaPredicted RBP13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 CCDC110Q8TBZ0 833 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 FUBP1Q96AE4 644 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 TMEM121Q9BTD3 319 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 ABCG8Q9H221 673 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 ARNT2Q9HBZ2 717 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 UBP1Q9NZI7 540 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 PAK5Q9P286 719 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 PKP3Q9Y446 797 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 OR1A2Q9Y585 309 aa13.96□□□□□ -0.17
SNRPA1-216ENST00000626000 GOLGA6L10A0A0M3HER8 536 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 C2orf81A6NN90 581 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 LMO7DNF2Z398 122 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 CRTAMO95727 393 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 ADRB1P08588 477 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 ATXN1LP0C7T5 689 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 TCP1P17987 556 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 EIF2B5Q13144 721 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 HENMT1Q5T8I9 393 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 RANBP10Q6VN20 620 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 LYSMD3Q7Z3D4 306 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 KDELC2Q7Z4H8 507 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 GKN2Q86XP6 184 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 GATAD2AQ86YP4 633 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 HID1Q8IV36 788 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 HIC2Q96JB3 615 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 FAM118BQ9BPY3 351 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 RMI1Q9H9A7 625 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 VPS18Q9P253 973 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 DOLKQ9UPQ8 538 aa13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 R3HDM2Q9Y2K5 976 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-216ENST00000626000 TCRBV7S2A1N4TA0A589 114 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 E7EVH7 732 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 PGRMC1O00264 195 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 SDC3O75056 442 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 IVLP07476 585 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 ANXA6P08133 673 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 CKMT2P17540 419 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 ADRA1AP35348 466 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 BNIP3Q12983 259 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 LRP8Q14114 963 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 PRRT3Q5FWE3 981 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 PRAMEF14Q5SWL7 426 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 RASGEF1CQ8N431 466 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 TRAM1L1Q8N609 369 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 EID2Q8N6I1 236 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 PLA2G15Q8NCC3 412 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 LMX1AQ8TE12 382 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 CNDP2Q96KP4 475 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 TBL1YQ9BQ87 522 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 FICDQ9BVA6 458 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 RIOK2Q9BVS4 552 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 ZCCHC2Q9C0B9 1178 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 TRNAU1APQ9NX07 287 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 TRMT1Q9NXH9 659 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 SHOC2Q9UQ13 582 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 SLC17A4Q9Y2C5 497 aa13.94□□□□□ -0.18
SNRPA1-216ENST00000626000 DCHS1Q96JQ0 3298 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 PRSS38A1L453 326 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 ENC1O14682 589 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 AP2A1O95782 977 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 IFNB1P01574 187 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 HADHAP40939 763 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 LMAN1P49257 510 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 DAB2P98082 770 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 ILF3Q12906 894 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 ITGA9Q13797 1035 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 TAF1AQ15573 450 aaPredicted RBP13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 GSTA5Q7RTV2 222 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 PHYKPLQ8IUZ5 450 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 SLC35F6Q8N357 371 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 SLC25A45Q8N413 288 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 SLC25A41Q8N5S1 370 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 OR6C4Q8NGE1 309 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 BRSK1Q8TDC3 778 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 ACTRT1Q8TDG2 376 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 BLOC1S5Q8TDH9 187 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 NAT6Q93015 286 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 VPS35Q96QK1 796 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 LRRC61Q9BV99 259 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 SPATA16Q9BXB7 569 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 GSDMCQ9BYG8 508 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms