RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 KLC4Q9NSK0 619 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 TBC1D14Q9P2M4 693 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 ZNF106Q9H2Y7 1883 aaKnown RBP13.19□□□□□ -0.3
C3orf56-201ENST00000624688 GPR39O43194 453 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 MGRN1O60291 552 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 OR1I1O60431 355 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 PABPC1P11940 636 aaKnown RBP13.19□□□□□ -0.3
C3orf56-201ENST00000624688 PTPN4P29074 926 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 HNF1BP35680 557 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 ASPHQ12797 758 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 GPM6BQ13491 265 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 CBX2Q14781 532 aaPredicted RBP13.19□□□□□ -0.3
C3orf56-201ENST00000624688 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
C3orf56-201ENST00000624688 ZRANB3Q5FWF4 1079 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 CTSL3PQ5NE16 218 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 LY6G5CQ5SRR4 150 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 PDE12Q6L8Q7 609 aaKnown RBP13.19□□□□□ -0.3
C3orf56-201ENST00000624688 TRIM67Q6ZTA4 783 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 ADIPOR2Q86V24 386 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 ADGRG2Q8IZP9 1017 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 AGR3Q8TD06 166 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 FAM136AQ96C01 138 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 LRRC3BQ96PB8 259 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 LBHD1Q9BQE6 289 aaPredicted RBP13.19□□□□□ -0.3
C3orf56-201ENST00000624688 TUBB6Q9BUF5 446 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 ALG9Q9H6U8 611 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 ATP13A3Q9H7F0 1226 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 GALPQ9UBC7 116 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 ZDHHC2Q9UIJ5 367 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
C3orf56-201ENST00000624688 H3BMM5 538 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 MATN2O00339 956 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 GAPDHSO14556 408 aaPredicted RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 GRID2O43424 1007 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 SRP72O76094 671 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 IPO13O94829 963 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 RHOBTB1O94844 696 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 TTPAP49638 278 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 RPL14P50914 215 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 SNRPD1P62314 119 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 PRKAA1Q13131 559 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 UBAP2LQ14157 1087 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 PTPRNQ16849 979 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 SLC9B1Q4ZJI4 515 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 KIAA0907Q7Z7F0 614 aaPredicted RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 RYBPQ8N488 228 aaPredicted RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 CCNYL1Q8N7R7 359 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 ITFG1Q8TB96 612 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 MIPEPQ99797 713 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 TBC1D10AQ9BXI6 508 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 SHCBP1LQ9BZQ2 653 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 CYP4F12Q9HCS2 524 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 SLCO3A1Q9UIG8 710 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 APOBEC2Q9Y235 224 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 FNDC3AQ9Y2H6 1198 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 PKP3Q9Y446 797 aa13.18□□□□□ -0.3
C3orf56-201ENST00000624688 OAS3Q9Y6K5 1087 aaKnown RBP13.18□□□□□ -0.3
C3orf56-201ENST00000624688 CAPN8A6NHC0 703 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 ZNF197O14709 1029 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 TRIM24O15164 1050 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 DIAPH2O60879 1101 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 CLDN7O95471 211 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 CALB2P22676 271 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 SERPINA4P29622 427 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 HNRNPH1P31943 449 aaKnown RBP13.17□□□□□ -0.3
C3orf56-201ENST00000624688 CA5AP35218 305 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 RASSF2P50749 326 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 ERVK-21P61565 698 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 ARHGAP8P85298 464 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 CACNG1Q06432 222 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
C3orf56-201ENST00000624688 OR4D1Q15615 310 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 TMEM215Q68D42 235 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 PAQR3Q6TCH7 311 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 RINLQ6ZS11 566 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 PIWIL4Q7Z3Z4 852 aaKnown RBP13.17□□□□□ -0.3
C3orf56-201ENST00000624688 C12orf76Q8N812 135 aaPredicted RBP13.17□□□□□ -0.3
C3orf56-201ENST00000624688 GRIN3AQ8TCU5 1115 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 ECHDC3Q96DC8 303 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 OTUB2Q96DC9 234 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 CCDC126Q96EE4 140 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 CNDP1Q96KN2 507 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 TUBGCP5Q96RT8 1024 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 SLC30A3Q99726 388 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 C19orf43Q9BQ61 176 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 CEP44Q9C0F1 390 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 P2RY12Q9H244 342 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 ZFYVE1Q9HBF4 777 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 TAS2R13Q9NYV9 303 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 NCKIPSDQ9NZQ3 722 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 MARK1Q9P0L2 795 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 ZMYM5Q9UJ78 669 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 SLC25A13Q9UJS0 675 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 IKZF3Q9UKT9 509 aa13.17□□□□□ -0.3
C3orf56-201ENST00000624688 SORCS3Q9UPU3 1222 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms