RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 MRPS17Q9Y2R5 130 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-211ENST00000621150 PRKAB1Q9Y478 270 aa12.43□□□□□ -0.42
TNFAIP3-211ENST00000621150 KCTD3Q9Y597 815 aa12.43□□□□□ -0.42
TNFAIP3-211ENST00000621150 RAI2Q9Y5P3 530 aa12.43□□□□□ -0.42
TNFAIP3-211ENST00000621150 BPTFQ12830 3046 aa12.43□□□□□ -0.42
TNFAIP3-211ENST00000621150 ERICH4A6NGS2 130 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 MAN2B1O00754 1011 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 TRAFD1O14545 582 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 TOP3BO95985 862 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 HADHAP40939 763 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 CCT5P48643 541 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 AP1S1P61966 158 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 MPP1Q00013 466 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 LAMB3Q13751 1172 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 INSCQ1MX18 579 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 NEPROQ6NW34 567 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 SRLQ86TD4 932 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 NDUFAF2Q8N183 169 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 FAM111AQ96PZ2 611 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 FAM167BQ9BTA0 163 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 SNX15Q9NRS6 342 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 TXNDC16Q9P2K2 825 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 GGA2Q9UJY4 613 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 NDRG2Q9UN36 371 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 PCDHGC4Q9Y5F7 938 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 PIAS3Q9Y6X2 628 aa12.42□□□□□ -0.42
TNFAIP3-211ENST00000621150 ANKRD66B4E2M5 251 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 AURKAO14965 403 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 HTRA2O43464 458 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 LAMTOR5O43504 91 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 PDGFAP04085 211 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 HOXB1P14653 301 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 LEPRP48357 1165 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 POLD2P49005 469 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 SERPINB8P50452 374 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 RHOAP61586 193 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 CTBP1Q13363 440 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 GRM3Q14832 879 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 ZKSCAN8Q15776 578 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 UGP2Q16851 508 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 LY6G5CQ5SRR4 150 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 ATXN7L2Q5T6C5 722 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 HHATQ5VTY9 493 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 C6orf89Q6UWU4 347 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 CMC1Q7Z7K0 106 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 LMNTD2Q8IXW0 634 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 YAF2Q8IY57 180 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 TTC16Q8NEE8 873 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 MDGA1Q8NFP4 955 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 GPR150Q8NGU9 434 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 STYXQ8WUJ0 223 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 FAM3CQ92520 227 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 ZNF75CPQ92670 426 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 PTPRN2Q92932 1015 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 ISG20Q96AZ6 181 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 SPSB2Q99619 263 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 FGFR1OP2Q9NVK5 253 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 SIRPGQ9P1W8 387 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 FBXO5Q9UKT4 447 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 FBXO4Q9UKT5 387 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 ARL5AQ9Y689 179 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 OTOGLQ3ZCN5 2332 aa12.41□□□□□ -0.42
TNFAIP3-211ENST00000621150 ARHGAP33O14559 1287 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 KLF11O14901 512 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 SNX3O60493 162 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 GLRA3O75311 464 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 S100BP04271 92 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 SRCP12931 536 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TYRP14679 529 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 CTSOP43234 321 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ABCG1P45844 678 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 RAB15P59190 212 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 DMC1Q14565 340 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TAF1AQ15573 450 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ZNF528Q3MIS6 628 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 PPM1JQ5JR12 505 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TBCELQ5QJ74 424 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ZNF470Q6ECI4 717 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ZC3H14Q6PJT7 736 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 KYAT3Q6YP21 454 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ERMP1Q7Z2K6 904 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ADIPOR2Q86V24 386 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 CILP2Q8IUL8 1156 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 TTC30BQ8N4P2 665 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 CELF5Q8N6W0 485 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 ZNF557Q8N988 423 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 CALML6Q8TD86 181 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 BLOC1S5Q8TDH9 187 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 PIH1D2Q8WWB5 315 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 HDAC10Q969S8 669 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 DNAJC1Q96KC8 554 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 SMIM14Q96QK8 99 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 BBS2Q9BXC9 721 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 C1QTNF2Q9BXJ5 285 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 SLC13A1Q9BZW2 595 aa12.4□□□□□ -0.42
TNFAIP3-211ENST00000621150 FAM107BQ9H098 131 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms