RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SLC25A23Q9BV35 468 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 KLHL25Q9H0H3 589 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 GID8Q9NWU2 228 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 SLC13A4Q9UKG4 626 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PKP3Q9Y446 797 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 IGKV6D-21A0A0A0MT36 114 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 OR51F1A6NGY5 319 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 I6L893 689 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DLGAP1O14490 977 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DPYSL4O14531 572 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 HOXA2O43364 376 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 RHOBTB1O94844 696 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 USP17L7P0C7H9 530 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ODC1P11926 461 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 IL7RP16871 459 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 GRK4P32298 578 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PTPN9P43378 593 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ALDH7A1P49419 539 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 OXCT1P55809 520 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TNK2Q07912 1038 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 INCA1Q0VD86 236 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 CDH17Q12864 832 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DDX39BQ13838 428 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 GRB7Q14451 532 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 USP41Q3LFD5 358 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 SLC25A52Q3SY17 297 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 GPR158Q5T848 1215 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ANKRD26P1Q6NSI1 321 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TMEM53Q6P2H8 277 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ABRAXAS1Q6UWZ7 409 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ERMP1Q7Z2K6 904 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PIM3Q86V86 326 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TMEM126BQ8IUX1 230 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DCP1BQ8IZD4 617 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TAGAPQ8N103 731 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 SMG8Q8ND04 991 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PSD4Q8NDX1 1056 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DQX1Q8TE96 717 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 SH3RF2Q8TEC5 729 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TANKQ92844 425 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TAMM41Q96BW9 452 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TMEM169Q96HH4 297 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 NEURL2Q9BR09 285 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 IL22Q9GZX6 179 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 RERGLQ9H628 205 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TBC1D13Q9NVG8 400 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 IFT80Q9P2H3 777 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PGAP2Q9UHJ9 254 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 KIAA1257Q9ULG3 409 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TIMM22Q9Y584 194 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 RAD54BQ9Y620 910 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 KANSL1LA0AUZ9 987 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 H2AFYO75367 372 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DAB1O75553 588 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 RECQL4O94761 1208 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 BMP10O95393 424 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 APOA4P06727 396 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 C8BP07358 591 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 RECQLP46063 649 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TKTL1P51854 596 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DIO3P55073 304 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 MLLT10P55197 1068 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 FOXA1P55317 472 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TBPL2Q6SJ96 375 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 DEFB128Q7Z7B8 93 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 STK32CQ86UX6 486 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PLD3Q8IV08 490 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 FUNDC1Q8IVP5 155 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 HM13Q8TCT9 377 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ANKRD49Q8WVL7 239 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ACDQ96AP0 544 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TSPAN17Q96FV3 270 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 EIF2AQ9BY44 585 aaKnown RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 AKTIPQ9H8T0 292 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 ABI2Q9NYB9 513 aaPredicted RBP6.95□□□□□ -1.3
NEDD9-216ENST00000620854 OR12D3Q9UGF7 316 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 VPS28Q9UK41 221 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 FBXO5Q9UKT4 447 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 PADI4Q9UM07 663 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 USP3Q9Y6I4 520 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 SLC30A1Q9Y6M5 507 aa6.95□□□□□ -1.3
NEDD9-216ENST00000620854 TCRBV3S1A0A5B6 114 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 YJEFN3A6XGL0 299 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 A8MT66 165 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 TRIM24O15164 1050 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 IPO13O94829 963 aaKnown RBP6.94□□□□□ -1.3
NEDD9-216ENST00000620854 GSTT2P0CG29 244 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 GSTT2BP0CG30 244 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 SMPD1P17405 629 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 ATP5F1P24539 256 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-216ENST00000620854 ADRA1BP35368 520 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 ACADSBP45954 432 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 GLUD2P49448 558 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 MAXP61244 160 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 TUBA4AP68366 448 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 GSTM4Q03013 218 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 NFATC3Q12968 1075 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 NAB1Q13506 487 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 TRIM60Q495X7 471 aa6.94□□□□□ -1.3
NEDD9-216ENST00000620854 PKDCCQ504Y2 493 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms