RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 RNF215Q9Y6U7 377 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 NBEAQ8NFP9 2946 aa17.11■□□□□ 0.33
HMGN3-203ENST00000620514 ZNF30P17039 623 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 CA4P22748 312 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 SLC1A1P43005 524 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 HLTFQ14527 1009 aaKnown RBP eCLIP17.1■□□□□ 0.33
HMGN3-203ENST00000620514 LLGL1Q15334 1064 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 QPCTQ16769 361 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 KIF26BQ2KJY2 2108 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 C14orf28Q4W4Y0 310 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 CERCAMQ5T4B2 595 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 FOXR1Q6PIV2 292 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 ADAMTSL4Q6UY14 1074 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 RHOT1Q8IXI2 618 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 LSMEM2Q8N112 164 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 GRAMD1AQ96CP6 724 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 HIC2Q96JB3 615 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 GFM1Q96RP9 751 aaKnown RBP17.1■□□□□ 0.33
HMGN3-203ENST00000620514 RIOK2Q9BVS4 552 aaKnown RBP17.1■□□□□ 0.33
HMGN3-203ENST00000620514 LRRN3Q9H3W5 708 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 GOLPH3Q9H4A6 298 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 SLC17A4Q9Y2C5 497 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 PLEKHM1Q9Y4G2 1056 aa17.1■□□□□ 0.33
HMGN3-203ENST00000620514 D6RAR5 112 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 INPP4BO15327 924 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 SPOPO43791 374 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 GLB1P16278 677 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 ADCY8P40145 1251 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 MAGEA1P43355 309 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 NOP2P46087 812 aaKnown RBP17.09■□□□□ 0.33
HMGN3-203ENST00000620514 MAZP56270 477 aaKnown RBP17.09■□□□□ 0.33
HMGN3-203ENST00000620514 RPL26P61254 145 aaKnown RBP17.09■□□□□ 0.33
HMGN3-203ENST00000620514 ZNF765Q7L2R6 523 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 CCNJLQ8IV13 435 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 SPACA3Q8IXA5 215 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 OR6C4Q8NGE1 309 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 OLFM3Q96PB7 478 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 WDR24Q96S15 920 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 LYSMD1Q96S90 227 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 GSDMCQ9BYG8 508 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 FOXP3Q9BZS1 431 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 TRNAU1APQ9NX07 287 aaKnown RBP17.09■□□□□ 0.33
HMGN3-203ENST00000620514 DDX56Q9NY93 547 aaKnown RBP17.09■□□□□ 0.33
HMGN3-203ENST00000620514 SEPT10Q9P0V9 454 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 TAAR2Q9P1P5 351 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 LRIT1Q9P2V4 623 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 APPL1Q9UKG1 709 aa17.09■□□□□ 0.33
HMGN3-203ENST00000620514 ATXN7L1Q9ULK2 861 aaPredicted RBP17.09■□□□□ 0.33
HMGN3-203ENST00000620514 RPL26L1Q9UNX3 145 aaKnown RBP17.09■□□□□ 0.33
HMGN3-203ENST00000620514 ARHGEF17Q96PE2 2063 aaPredicted RBP17.08■□□□□ 0.33
HMGN3-203ENST00000620514 C1orf232A0A0U1RR37 186 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 FGF1P05230 155 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 IVLP07476 585 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 RBMS1P29558 406 aaKnown RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 PCBP4P57723 403 aaKnown RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 ERVPABLB-1P60509 514 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 CTBSQ01459 385 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 ILF3Q12906 894 aaKnown RBP eCLIP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 GALNT3Q14435 633 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 PDK1Q15118 436 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 SOWAHCQ53LP3 525 aaPredicted RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 ODF2Q5BJF6 829 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 SLC30A9Q6PML9 568 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 MARK2Q7KZI7 788 aaKnown RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 KDELC2Q7Z4H8 507 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 NLRP8Q86W28 1048 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 WDR36Q8NI36 951 aaKnown RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 ZDHHC1Q8WTX9 485 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 PATE1Q8WXA2 126 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 SCARF2Q96GP6 870 aaPredicted RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 SLC46A1Q96NT5 459 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 AGAP3Q96P47 875 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 BBC3Q96PG8 261 aaPredicted RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 MLPHQ9BV36 600 aaPredicted RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 BRD8Q9H0E9 1235 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 EPB41L5Q9HCM4 733 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 SAE1Q9UBE0 346 aaPredicted RBP17.08■□□□□ 0.32
HMGN3-203ENST00000620514 DNPEPQ9ULA0 475 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 ALG6Q9Y672 507 aa17.08■□□□□ 0.32
HMGN3-203ENST00000620514 CCDC187A0A096LP49 1063 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 ANKRD66B4E2M5 251 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 PPP1R12AO14974 1030 aaPredicted RBP17.07■□□□□ 0.32
HMGN3-203ENST00000620514 PECAM1P16284 738 aaPredicted RBP17.07■□□□□ 0.32
HMGN3-203ENST00000620514 ZFXP17010 805 aaPredicted RBP17.07■□□□□ 0.32
HMGN3-203ENST00000620514 CDKN2BP42772 138 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 TLE3Q04726 772 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 TAZQ16635 292 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 KAZNQ674X7 775 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 IGF2-ASQ6U949 168 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 SPRED1Q7Z699 444 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 C17orf82Q86X59 251 aaPredicted RBP17.07■□□□□ 0.32
HMGN3-203ENST00000620514 NRSN1Q8IZ57 195 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 ZNF248Q8NDW4 579 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 KIAA1524Q8TCG1 905 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 EID2BQ96D98 161 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 IMP4Q96G21 291 aaKnown RBP17.07■□□□□ 0.32
HMGN3-203ENST00000620514 COX14Q96I36 57 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 TRIB3Q96RU7 358 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 PRORYQ9H606 182 aa17.07■□□□□ 0.32
HMGN3-203ENST00000620514 THSD1Q9NS62 852 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms