RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 IGDCC3Q8IVU1 814 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 TMEM199Q8N511 208 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 MAB21L3Q8N8X9 362 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 FAXDC2Q96IV6 333 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 PANX3Q96QZ0 392 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 GATA5Q9BWX5 397 aaPredicted RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 RHOBTB2Q9BYZ6 727 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 IGSF9Q9P2J2 1179 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 VPS51Q9UID3 782 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF214Q9UL59 606 aaPredicted RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 GIT1Q9Y2X7 761 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 TEX264Q9Y6I9 313 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 E9PAM4 449 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SLC28A1O00337 649 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 CDK18Q07002 472 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 POM121L1PQ3SYA9 428 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 KIAA1324Q6UXG2 1013 aaKnown RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 LDB1Q86U70 411 aaPredicted RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 DENND1CQ8IV53 801 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 MOSPD2Q8NHP6 518 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 TWIST2Q8WVJ9 160 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 HNRNPABQ99729 332 aaKnown RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 BCO2Q9BYV7 579 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 DIABLOQ9NR28 239 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 FAM105AQ9NUU6 356 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ARL15Q9NXU5 204 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SLC7A8Q9UHI5 535 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 TBC1D30Q9Y2I9 924 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 EPN2O95208 641 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 CHRNGP07510 517 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 COX7A2P14406 83 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 CTNNB1P35222 781 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ACTR3P61158 418 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 TRAF3Q13114 568 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 MPP2Q14168 576 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ADGRE1Q14246 886 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SIX1Q15475 284 aaPredicted RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 TSNQ15631 228 aaKnown RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 FAM187BQ17R55 369 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 UBAP2Q5T6F2 1119 aaKnown RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ANO7Q6IWH7 933 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 FBXL19Q6PCT2 694 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 GCNT7Q6ZNI0 430 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 RNF44Q7L0R7 432 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SPATA19Q7Z5L4 167 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 CACTIN-AS1Q8N1I8 211 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 AADATQ8N5Z0 425 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 PTCD2Q8WV60 388 aaKnown RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SUSD6Q92537 303 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 AGO3Q9H9G7 860 aaKnown RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ZFP14Q9HCL3 533 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF358Q9NW07 568 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 AP3M1Q9Y2T2 418 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 A0A088AWK7 358 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF10P21506 573 aaPredicted RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 WARSP23381 471 aaKnown RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 PIK3CGP48736 1102 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ATP6V0D1P61421 351 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 EPS8Q12929 822 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SOWAHAQ2M3V2 549 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 INTS6LQ5JSJ4 861 aaKnown RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 RETSATQ6NUM9 610 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 C11orf88Q6PI97 169 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 PAOXQ6QHF9 649 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 TRAPPC5Q8IUR0 188 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SCAIQ8N9R8 606 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 UXS1Q8NBZ7 420 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 FAM156AQ8NDB6 213 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SLITRK2Q9H156 845 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ZNHIT2Q9UHR6 403 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 DNMT3LQ9UJW3 386 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SH3BGRLO75368 114 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 C4BPBP20851 252 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 NTSP30990 170 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 CD52P31358 61 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 MC4RP32245 332 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 GPR15P49685 360 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 VPS26BQ4G0F5 336 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF618Q5T7W0 954 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 ST13P5Q8NFI4 369 aaPredicted RBP8.34□□□□□ -1.07
ALMS1-208ENST00000620466 HEXDCQ8WVB3 486 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 EXOC2Q96KP1 924 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 PPP3R2Q96LZ3 170 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 BTBD9Q96Q07 612 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 PNPLA8Q9NP80 782 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 KLHL3Q9UH77 587 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 SLC27A5Q9Y2P5 690 aa8.34□□□□□ -1.07
ALMS1-208ENST00000620466 KPNA3O00505 521 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TYROBPO43914 113 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ACSL4O60488 711 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TBL1XO60907 577 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 RPP40O75818 363 aaKnown RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CYP3A5P20815 502 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ATP5C1P36542 298 aaKnown RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 TALDO1P37837 337 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 PSEN1P49768 467 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 DGCR6Q14129 220 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 CYP2A13Q16696 494 aa8.33□□□□□ -1.08
ALMS1-208ENST00000620466 ESRP1Q6NXG1 681 aaKnown RBP8.33□□□□□ -1.08
ALMS1-208ENST00000620466 KLHL24Q6TFL4 600 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms