RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FOSL1P15407 271 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 BPIP17213 487 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 SULT1E1P49888 294 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 RENBPP51606 427 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 VAV2P52735 878 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 CDK3Q00526 305 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 DEUP1Q05D60 604 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 MRPL49Q13405 166 aaKnown RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 CYTH1Q15438 398 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 LONRF1Q17RB8 773 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 PYCR3Q53H96 274 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 SP5Q6BEB4 398 aaPredicted RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 TTC7BQ86TV6 843 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 ZNF808Q8N4W9 903 aaPredicted RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 RTL3Q8N8U3 475 aaKnown RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 PLA2G15Q8NCC3 412 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 RCBTB1Q8NDN9 531 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 CPXM1Q96SM3 734 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 ULBP3Q9BZM4 244 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 DPEP2Q9H4A9 486 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 ATP13A3Q9H7F0 1226 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 ACSS2Q9NR19 701 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 TMEM9Q9P0T7 183 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 TMEM59LQ9UK28 342 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 PCDHA7Q9UN72 937 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 OR1A2Q9Y585 309 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 PIEZO2Q9H5I5 2752 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 A1L4Q6 167 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 RAMP2O60895 175 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 KCNJ13O60928 360 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 SPAG6O75602 509 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 RECQL5O94762 991 aaPredicted RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 NEFLP07196 543 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 NUDT7P0C024 238 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 SERPINA4P29622 427 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 GNA15P30679 374 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 ADCY8P40145 1251 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 C8orf34Q49A92 452 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 ZNF658Q5TYW1 1059 aaPredicted RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 C16orf46Q6P387 395 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 KDELC2Q7Z4H8 507 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 SRRM1Q8IYB3 904 aaKnown RBP4.55□□□□□ -1.68
SNCA-213ENST00000618500 SHC3Q92529 594 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 NINJ1Q92982 152 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 RANBP9Q96S59 729 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 TMUB1Q9BVT8 246 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 ACTL8Q9H568 366 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 CFAP45Q9UL16 551 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 PADI1Q9ULC6 663 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 SUFUQ9UMX1 484 aa4.55□□□□□ -1.68
SNCA-213ENST00000618500 PCDH17O14917 1159 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 PRAMEF11O60813 436 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 HEXIM1O94992 359 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 CD2BP2O95400 341 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 CYP2A6P11509 494 aaPredicted RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 NELFEP18615 380 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 XPAP23025 273 aaPredicted RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 ACVRL1P37023 503 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 CTBSQ01459 385 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ELOAQ14241 798 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 ATP1A1-AS1Q5TC04 95 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 KCTD16Q68DU8 428 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 IYDQ6PHW0 289 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 TECPR1Q7Z6L1 1165 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 SRLQ86TD4 932 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ARHGEF19Q8IW93 802 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 MSANTD4Q8NCY6 345 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 SLC37A2Q8TED4 501 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 PPP4R1Q8TF05 950 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 FATE1Q969F0 183 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ZDHHC16Q969W1 377 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 AHCYL2Q96HN2 611 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 DHTKD1Q96HY7 919 aaPredicted RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 NCAPGQ9BPX3 1015 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 SLX1AQ9BQ83 275 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 WRAP53Q9BUR4 548 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 PANK2Q9BZ23 570 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 NOL6Q9H6R4 1146 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 LRRC19Q9H756 370 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 CARS2Q9HA77 564 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 PDE7BQ9NP56 450 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 AGPAT4Q9NRZ5 378 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 POT1Q9NUX5 634 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 B3GNT3Q9Y2A9 372 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 PLEKHM1Q9Y4G2 1056 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 MRPS18BQ9Y676 258 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 CDK2AP1O14519 115 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 CPNE3O75131 537 aaKnown RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 ZRANB2O95218 330 aaKnown RBP eCLIP4.54□□□□□ -1.68
SNCA-213ENST00000618500 SOD1P00441 154 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ELFN1P0C7U0 828 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ZNF28P17035 718 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ZNF30P17039 623 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 CASP1P29466 404 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 RHOAP61586 193 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ACY1Q03154 408 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 AMZ1Q400G9 498 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 ZNF324BQ6AW86 544 aaPredicted RBP4.54□□□□□ -1.68
SNCA-213ENST00000618500 ZSWIM9Q86XI8 627 aa4.54□□□□□ -1.68
SNCA-213ENST00000618500 FAM129CQ86XR2 697 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms