RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 OR4E2Q8NGC2 313 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 OR4L1Q8NH43 312 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 METTL6Q8TCB7 284 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 FRS2Q8WU20 508 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 ROGDIQ9GZN7 287 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 VPS4AQ9UN37 437 aa10.9□□□□□ -0.66
POLR2A-209ENST00000617998 MAP2K7O14733 419 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 MID1O15344 667 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 FAM163BP0C2L3 166 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 GRAMD1BQ3KR37 738 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 DCAF12L1Q5VU92 463 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 ZSWIM2Q8NEG5 633 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 TRPV1Q8NER1 839 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 OR2T34Q8NGX1 318 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 MRPL48Q96GC5 212 aaKnown RBP10.9□□□□□ -0.67
POLR2A-209ENST00000617998 ZBED3Q96IU2 234 aaPredicted RBP10.9□□□□□ -0.67
POLR2A-209ENST00000617998 ECSITQ9BQ95 431 aa10.9□□□□□ -0.67
POLR2A-209ENST00000617998 A0A1W2PQJ5 194 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 DCTN3O75935 186 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 NOL4O94818 638 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 EEF1B2P24534 225 aaKnown RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 RFTN1Q14699 578 aaPredicted RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 TTC23Q5W5X9 447 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 KRT222Q8N1A0 295 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 UNKQ9C0B0 810 aaKnown RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 RBM12Q9NTZ6 932 aaKnown RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ATAD3AQ9NVI7 634 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 SLC12A4Q9UP95 1085 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 IGLV3-22A0A075B6J6 115 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 PRAMEF1O95521 474 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 CCNFP41002 786 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 FOLR3P41439 243 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 WNT3AP56704 352 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 MGAT5Q09328 741 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 CDKN3Q16667 212 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 SOWAHAQ2M3V2 549 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ABHD13Q7L211 337 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 OR4K17Q8NGC6 315 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 KCNJ9Q92806 393 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ART5Q96L15 291 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 FOXQ1Q9C009 403 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 COQ6Q9Y2Z9 468 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 SLC28A1O00337 649 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 PFKLP17858 780 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 GRK6P43250 576 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 RRADP55042 308 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ACY1Q03154 408 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 FAM20CQ8IXL6 584 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 CCNL2Q96S94 520 aaPredicted RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 OSBPL10Q9BXB5 764 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 HPSEQ9Y251 543 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 MORC2Q9Y6X9 1032 aaPredicted RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 A0A0J9YVX5 310 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 C5orf60A6NFR6 353 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 PSMB4P28070 264 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 SLC7A1P30825 629 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 RRM2P31350 389 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 HSP90AA5PQ58FG0 334 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 DCAF12Q5T6F0 453 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 TMPRSS11BQ86T26 416 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 PCYOX1LQ8NBM8 494 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 FAM13CQ8NE31 585 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ZDHHC1Q8WTX9 485 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 C9orf72Q96LT7 481 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ZSWIM1Q9BR11 485 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 TUBB6Q9BUF5 446 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 AMACRQ9UHK6 382 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 RAPGEFL1Q9UHV5 662 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 PCDHGC5Q9Y5F6 944 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 PCDHA3Q9Y5H8 950 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 PHRF1Q9P1Y6 1649 aaKnown RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 PRKCGP05129 697 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 RFC1P35251 1148 aaPredicted RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 SERPINB4P48594 390 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 IL10RBQ08334 325 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 UBE2J2Q8N2K1 259 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 KIAA0895Q8NCT3 520 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 TSACCQ96A04 125 aaPredicted RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 IL22Q9GZX6 179 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 RNF121Q9H920 327 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 FZD3Q9NPG1 666 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 XPNPEP1Q9NQW7 623 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ANO9A1A5B4 782 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 WDR27A2RRH5 827 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 IL33O95760 270 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 CST3P01034 146 aaPredicted RBP10.89□□□□□ -0.67
POLR2A-209ENST00000617998 KCNJ1P48048 391 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 CASP5P51878 434 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 CACNG1Q06432 222 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 GPAT3Q53EU6 434 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 SPANXN3Q5MJ09 141 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 IFNEQ86WN2 208 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 OR4K2Q8NGD2 314 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 ANKRD49Q8WVL7 239 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 DNASE1L2Q92874 299 aa10.89□□□□□ -0.67
POLR2A-209ENST00000617998 SLC35C1Q96A29 364 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms