RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RMND5AQ9H871 391 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 ZFP14Q9HCL3 533 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 FNIP2Q9P278 1114 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 SLC13A4Q9UKG4 626 aa13.17□□□□□ -0.3
PPP4R3B-206ENST00000616407 TMEM233B4DJY2 109 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 NPHS1O60500 1241 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CPSF4O95639 269 aaKnown RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 EPB42P16452 691 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 HIST2H2ACQ16777 129 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 STEAP4Q687X5 459 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 HIST2H2AA3Q6FI13 130 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 PM20D1Q6GTS8 502 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 TXNDC11Q6PKC3 985 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CENPLQ8N0S6 344 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 TMEM248Q9NWD8 314 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 ZDHHC2Q9UIJ5 367 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 GJD2Q9UKL4 321 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 A0A0J9YYE9 177 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SNAP91O60641 907 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 ULK1O75385 1050 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 GALTP07902 379 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 ATP6V1B2P21281 511 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 MAPK1P28482 360 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CTNNB1P35222 781 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 ERAP2Q6P179 960 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 TREML1Q86YW5 311 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 PHTF2Q8N3S3 785 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 TWIST2Q8WVJ9 160 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SELENOMQ8WWX9 145 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 IGSF8Q969P0 613 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 NKX1-2Q9UD57 310 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 EGFL7Q9UHF1 273 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 YIPF1Q9Y548 306 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 GNG14A0A1W2PPG7 69 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SLC25A14O95258 325 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 PARNO95453 639 aaKnown RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 PCNAP12004 261 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CD68P34810 354 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CCR10P46092 362 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 LRRC74AQ0VAA2 488 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 RALGDSQ12967 914 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 MAD2L1Q13257 205 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CPSF6Q16630 551 aaKnown RBP eCLIP13.16□□□□□ -0.34e-6■□□□□ 11
PPP4R3B-206ENST00000616407 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 FAM171BQ6P995 826 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 PIM3Q86V86 326 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CPNE9Q8IYJ1 553 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 TTC9BQ8N6N2 239 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 C1orf74Q96LT6 269 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SH3GL1Q99961 368 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 MFSD1Q9H3U5 465 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 PNMA8BQ9ULN7 279 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 TLL2Q9Y6L7 1015 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SSC5DA1L4H1 1573 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 A0A0D9SEW6 157 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SIX3O95343 332 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CYP11A1P05108 521 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 UGT2B4P06133 528 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CYP2A6P11509 494 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 VCLP18206 1134 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 CLCQ05315 142 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 PIK3R6Q5UE93 754 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 PAQR3Q6TCH7 311 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 TRMT11Q7Z4G4 463 aaKnown RBP13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 AMIGO2Q86SJ2 522 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 RAB42Q8N4Z0 105 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 WDR60Q8WVS4 1066 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 SKA1Q96BD8 255 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 TBCDQ9BTW9 1192 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 MCM8Q9UJA3 840 aa13.16□□□□□ -0.3
PPP4R3B-206ENST00000616407 BHMG1C9JSJ3 638 aaPredicted RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 NEDD8-MDP1E9PL57 170 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 M0QZQ0 153 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 PRAMEF1O95521 474 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 SEMG2Q02383 582 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 NIPAL4Q0D2K0 466 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 PRKG2Q13237 762 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 TIGD2Q4W5G0 525 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 MPPE1Q53F39 396 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 TXNDC8Q6A555 127 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 FAM9CQ8IZT9 166 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 PGAP3Q96FM1 320 aaPredicted RBP13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 MRGPRX2Q96LB1 330 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 HBEGFQ99075 208 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 MGAT4DA6NG13 374 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 TBX10O75333 385 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 GLUD1P00367 558 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 FAM58BPP0C7Q3 252 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 ETV4P43268 484 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 USP46P62068 366 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 CYP4F8P98187 520 aa13.15□□□□□ -0.3
PPP4R3B-206ENST00000616407 TNFAIP8L3Q5GJ75 292 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms