RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 NTN4Q9HB63 628 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CDHR5Q9HBB8 845 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 STARD7Q9NQZ5 370 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 HOXC11O43248 304 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 TRUB2O95900 331 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 ANXA6P08133 673 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 LAPTM5Q13571 262 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 ZNF460Q14592 562 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 PLEKHG6Q3KR16 790 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CDYL2Q8N8U2 506 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 ANKFN1Q8N957 763 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 SKA2Q8WVK7 121 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CCNB1IP1Q9NPC3 277 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 CD274Q9NZQ7 290 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 ZNF624Q9P2J8 865 aaPredicted RBP13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 MALT1Q9UDY8 824 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 YWHAQP27348 245 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 DPY19L2P1Q6NXN4 242 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 ZNF605Q86T29 641 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 LDHDQ86WU2 507 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 ULK4Q96C45 1275 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 NECTIN4Q96NY8 510 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
PPP4R3B-205ENST00000616288 A0A087WZ62 844 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 MAGEB16A2A368 324 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 PTTG1O95997 202 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 ALDOAP04075 364 aaKnown RBP13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 RBP1P09455 135 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 ARSFP54793 590 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 OLR1P78380 273 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 STARD3Q14849 445 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 COLGALT2Q8IYK4 626 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 CNIH3Q8TBE1 160 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 PCNPQ8WW12 178 aaKnown RBP13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 ZBTB45Q96K62 511 aaPredicted RBP13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 SIK2Q9H0K1 926 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 ALG9Q9H6U8 611 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 NWD1Q149M9 1564 aa13.52□□□□□ -0.24
PPP4R3B-205ENST00000616288 A0A1B0GW55 424 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 TP53P04637 393 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 DUX4L2P0CJ85 424 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 DUX4L3P0CJ86 424 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 DUX4L4P0CJ87 422 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 DUX4L5P0CJ88 424 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 DUX4L6P0CJ89 424 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 DUX4L7P0CJ90 424 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 IGFBP5P24593 272 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 HOXA10P31260 410 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 LEPRP48357 1165 aaKnown RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 HARS2P49590 506 aaKnown RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 EN1Q05925 392 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 HSF5Q4G112 596 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 FAM117BQ6P1L5 589 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 FSTL5Q8N475 847 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 RBM4BQ9BQ04 359 aaKnown RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 SYT11Q9BT88 431 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 RBM4Q9BWF3 364 aaKnown RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 DUX4Q9UBX2 424 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 C9IYK1 514 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 HAT1O14929 419 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 ZBTB7AO95365 584 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 CHRM5P08912 532 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 ATP6V1E1P36543 226 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 JAK3P52333 1124 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 NRG1Q02297 640 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 BST2Q10589 180 aaKnown RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 CRY1Q16526 586 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 SNAPC1Q16533 368 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 HIST2H2ACQ16777 129 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 RPS27LQ71UM5 84 aaKnown RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 CHMP1BQ7LBR1 199 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 ZNF34Q8IZ26 560 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 FRMD6Q96NE9 622 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 HSD17B14Q9BPX1 270 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 MMP27Q9H306 513 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 CCM2LQ9NUG4 571 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 IKZF3Q9UKT9 509 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 ANKRD6Q9Y2G4 727 aa13.52□□□□□ -0.25
PPP4R3B-205ENST00000616288 A0A0G2JPF8 293 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 HNRNPCL3B7ZW38 293 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 RASAL1O95294 804 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 PLATP00750 562 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 HNRNPCL4P0DMR1 293 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 UBL4AP11441 157 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 KCNA5P22460 613 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 TIE1P35590 1138 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 MLLT3P42568 568 aaPredicted RBP13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 PGGT1BP53609 377 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 GBE1Q04446 702 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 DBPQ10586 325 aaPredicted RBP13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 CDK10Q15131 360 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 RABL3Q5HYI8 236 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 TDRD10Q5VZ19 366 aaKnown RBP13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 TYW3Q6IPR3 259 aaKnown RBP13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 MILR1Q7Z6M3 343 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 RIOX2Q8IUF8 465 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 RDH11Q8TC12 318 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 PSKH2Q96QS6 385 aa13.51□□□□□ -0.25
PPP4R3B-205ENST00000616288 FBRSL1Q9HCM7 1045 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms