RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 XPNPEP2O43895 674 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 DCKP27707 260 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 MAGEA12P43365 314 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 CLK3P49761 638 aaKnown RBP13.15□□□□□ -0.3
MSH6-214ENST00000616033 VBP1P61758 197 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 NRG1Q02297 640 aaPredicted RBP13.15□□□□□ -0.3
MSH6-214ENST00000616033 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
MSH6-214ENST00000616033 TRAP1Q12931 704 aaKnown RBP13.15□□□□□ -0.3
MSH6-214ENST00000616033 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 NEPROQ6NW34 567 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 METTL7BQ6UX53 244 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 PDZD4Q76G19 769 aaPredicted RBP13.15□□□□□ -0.3
MSH6-214ENST00000616033 MIER2Q8N344 545 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 SFRP1Q8N474 314 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 CHPT1Q8WUD6 406 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 TBCDQ9BTW9 1192 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 FUNDC2Q9BWH2 189 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 SMARCAD1Q9H4L7 1026 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 ALG2Q9H553 416 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 NANOGQ9H9S0 305 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 PRMT7Q9NVM4 692 aaPredicted RBP13.15□□□□□ -0.3
MSH6-214ENST00000616033 CARD8Q9Y2G2 431 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 ANKRD6Q9Y2G4 727 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 CPQQ9Y646 472 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
MSH6-214ENST00000616033 SOWAHBA6NEL2 793 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 I6L893 689 aaPredicted RBP13.14□□□□□ -0.31
MSH6-214ENST00000616033 TAF4O00268 1085 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 AXIN1O15169 862 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 S100A1P23297 94 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 MTPNP58546 118 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 FAM209AQ5JX71 171 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 TMTC4Q5T4D3 741 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 BROXQ5VW32 411 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 IQSEC1Q6DN90 963 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 GADL1Q6ZQY3 521 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 TAS2R42Q7RTR8 314 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 ADGRG5Q8IZF4 528 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 PTGR2Q8N8N7 351 aaPredicted RBP13.14□□□□□ -0.31
MSH6-214ENST00000616033 PPHLN1Q8NEY8 458 aaKnown RBP13.14□□□□□ -0.31
MSH6-214ENST00000616033 FIG4Q92562 907 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 SEZ6LQ9BYH1 1024 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 ULBP1Q9BZM6 244 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 EIF2B3Q9NR50 452 aaKnown RBP13.14□□□□□ -0.31
MSH6-214ENST00000616033 AGPAT4Q9NRZ5 378 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
MSH6-214ENST00000616033 PSME2Q9UL46 239 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 STAP1Q9ULZ2 295 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 SNX5Q9Y5X3 404 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 LINC00854A0A1B0GVQ3 168 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 YJEFN3A6XGL0 299 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 AQP9O43315 295 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 SNAP91O60641 907 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 DLGAP3O95886 979 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 ITGB6P18564 788 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 FAM117BQ6P1L5 589 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 FAM83AQ86UY5 434 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 SLC22A16Q86VW1 577 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 PELI3Q8N2H9 469 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 LRRC58Q96CX6 371 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 SLC7A5P2Q9GIP4 190 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
MSH6-214ENST00000616033 OR12D3Q9UGF7 316 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 INVSQ9Y283 1065 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 CLDN25C9JDP6 229 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 UBXN8O00124 270 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 CCRL2O00421 344 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 PROZP22891 400 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 SLC6A2P23975 617 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 NOS2P35228 1153 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 ADRA1BP35368 520 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 CCT8P50990 548 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 AQP6Q13520 282 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 CCNYL2Q5T2Q4 361 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 AGAP9Q5VTM2 703 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 SPESP1Q6UW49 350 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 GALNT5Q7Z7M9 940 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 ALDH16A1Q8IZ83 802 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 TRPV3Q8NET8 790 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 TEX37Q96LM6 180 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 GPR78Q96P69 363 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 ACOX2Q99424 681 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 GPR20Q99678 358 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 RHOBTB2Q9BYZ6 727 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 GNPTGQ9UJJ9 305 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 COMMD10Q9Y6G5 202 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 LTBP1Q14766 1721 aa13.14□□□□□ -0.31
MSH6-214ENST00000616033 A0A1B0GTL3 188 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 UBA6A0AVT1 1052 aaPredicted RBP13.13□□□□□ -0.31
MSH6-214ENST00000616033 BCAS1O75363 584 aaPredicted RBP13.13□□□□□ -0.31
MSH6-214ENST00000616033 SULT1C4O75897 302 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 TCF3P15923 654 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 PSMB9P28065 219 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
MSH6-214ENST00000616033 NPY2RP49146 381 aa13.13□□□□□ -0.31
MSH6-214ENST00000616033 SH3BP2P78314 561 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms