RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 AGBL5Q8NDL9 886 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 OR4D9Q8NGE8 314 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 AHCYL2Q96HN2 611 aaKnown RBP17.8■□□□□ 0.44
SMN2-213ENST00000614240 GBP4Q96PP9 640 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 CSPG4P5Q96PW8 444 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 OR2M4Q96R27 311 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 NAT10Q9H0A0 1025 aaKnown RBP17.8■□□□□ 0.44
SMN2-213ENST00000614240 HSD3B7Q9H2F3 369 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 ETNK2Q9NVF9 386 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 CD84Q9UIB8 345 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 TMEM98Q9Y2Y6 226 aa17.8■□□□□ 0.44
SMN2-213ENST00000614240 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.79■□□□□ 0.44
SMN2-213ENST00000614240 DDX3XO00571 662 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMN2-213ENST00000614240 PPM1DO15297 605 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 MAFKO60675 156 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 PPFIA2O75334 1257 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 PEX11BO96011 259 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 FGF3P11487 239 aaPredicted RBP17.79■□□□□ 0.44
SMN2-213ENST00000614240 WT1P19544 449 aaPredicted RBP17.79■□□□□ 0.44
SMN2-213ENST00000614240 IL1R2P27930 398 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 SERPINB6P35237 376 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 EPHB1P54762 984 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 CDH6P55285 790 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 PTPRRQ15256 657 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 MARK2Q7KZI7 788 aaKnown RBP17.79■□□□□ 0.44
SMN2-213ENST00000614240 CBARPQ8N350 705 aaPredicted RBP17.79■□□□□ 0.44
SMN2-213ENST00000614240 ART4Q93070 314 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 AP2M1Q96CW1 435 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 DPYSL5Q9BPU6 564 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 NT5MQ9NPB1 228 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 RTN4Q9NQC3 1192 aaKnown RBP17.79■□□□□ 0.44
SMN2-213ENST00000614240 SLC39A1Q9NY26 324 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 AIPL1Q9NZN9 384 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 PLEKHM1Q9Y4G2 1056 aa17.79■□□□□ 0.44
SMN2-213ENST00000614240 TRBV23OR9-2A0A075B6M9 112 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 IGHV1OR21-1A0A087WYE8 117 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 A0A0U1RQS6 177 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 GOLGA6L22H0YM25 854 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 RARAP10276 462 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 DPTQ07507 201 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 KRT81Q14533 505 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 LRRC66Q68CR7 880 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 TECPR1Q7Z6L1 1165 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 FAM129CQ86XR2 697 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 NRSN1Q8IZ57 195 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMN2-213ENST00000614240 NKD1Q969G9 470 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 MCCC1Q96RQ3 725 aaPredicted RBP17.78■□□□□ 0.44
SMN2-213ENST00000614240 SEMA3CQ99985 751 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 PCDHGA3Q9Y5H0 932 aa17.78■□□□□ 0.44
SMN2-213ENST00000614240 SCN8AQ9UQD0 1980 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 ASMTLO95671 621 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 SKILP12757 684 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 TCF4P15884 667 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 ITGB6P18564 788 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 SSR1P43307 286 aaKnown RBP17.77■□□□□ 0.44
SMN2-213ENST00000614240 PIGHQ14442 188 aaPredicted RBP17.77■□□□□ 0.44
SMN2-213ENST00000614240 ADAMTSL4Q6UY14 1074 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 RFLNAQ6ZTI6 216 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 TRIM74Q86UV6 250 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 GALNT13Q8IUC8 556 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 OR10G6Q8NH81 332 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 PIH1D2Q8WWB5 315 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 HTR3CQ8WXA8 447 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 SLC38A3Q99624 504 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 ASPSCR1Q9BZE9 553 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 ABCG8Q9H221 673 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 ST14Q9Y5Y6 855 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 B3GALT1Q9Y5Z6 326 aa17.77■□□□□ 0.44
SMN2-213ENST00000614240 MYO18BQ8IUG5 2567 aa17.77■□□□□ 0.43
SMN2-213ENST00000614240 EFCAB7A8K855 629 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 INPP4BO15327 924 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 SUV39H1O43463 412 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 PYGLP06737 847 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 PDHA1P08559 390 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 THRAP10827 490 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 CSF2RBP32927 897 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 PRKCIP41743 596 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 GPLD1P80108 840 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 TYRO3Q06418 890 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 LRP8Q14114 963 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 CLCA4Q14CN2 919 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 PYCR3Q53H96 274 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 SNAP47Q5SQN1 464 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 CCDC122Q5T0U0 273 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 CCDC183Q5T5S1 534 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 DCAF12Q5T6F0 453 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 E4F1Q66K89 784 aaPredicted RBP17.76■□□□□ 0.43
SMN2-213ENST00000614240 TMEM71Q6P5X7 295 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 ZNF761Q86XN6 746 aaPredicted RBP17.76■□□□□ 0.43
SMN2-213ENST00000614240 CACNA2D3Q8IZS8 1091 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 SCAMP4Q969E2 229 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 PMEPA1Q969W9 287 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 SCARF2Q96GP6 870 aaPredicted RBP17.76■□□□□ 0.43
SMN2-213ENST00000614240 FUCA2Q9BTY2 467 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 DDA1Q9BW61 102 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 SLC12A9Q9BXP2 914 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 SLC25A18Q9H1K4 315 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 PCDH18Q9HCL0 1135 aa17.76■□□□□ 0.43
SMN2-213ENST00000614240 GEMIN8Q9NWZ8 242 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms