RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 C1QTNF2Q9BXJ5 285 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 GBA3Q9H227 469 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 FZD3Q9NPG1 666 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 VPS45Q9NRW7 570 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 SEMA4GQ9NTN9 838 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 SAMD15Q9P1V8 674 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 UTP11Q9Y3A2 253 aaKnown RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 CNOT1A5YKK6 2376 aaKnown RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 A0A0J9YYE9 177 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 A0A0U1RQS6 177 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 NPIPB15A6NHN6 443 aaPredicted RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 ANKRD66B4E2M5 251 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 LRP3O75074 770 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 AGTP01019 485 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 IFNB1P01574 187 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 TRBC1P01850 177 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 ITGAVP06756 1048 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 PSMB4P28070 264 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 HNF1BP35680 557 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 KCNJ1P48048 391 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 WNT3AP56704 352 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 RPL26P61254 145 aaKnown RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 RACK1P63244 317 aaKnown RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 IRX4P78413 519 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 SGCGQ13326 291 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 GALNT3Q14435 633 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 SLC14A2Q15849 920 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 DUOXA1Q1HG43 343 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 CMPK2Q5EBM0 449 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 TRIM61Q5EBN2 209 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 KDELC1Q6UW63 502 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 USP45Q70EL2 814 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 DPPA4Q7L190 304 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 PRUNE1Q86TP1 453 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 ALYREFQ86V81 257 aaKnown RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 EGFL6Q8IUX8 553 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 TEX9Q8N6V9 391 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 OR2W6PQ8NHA6 318 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 CEP76Q8TAP6 659 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 ZNF483Q8TF39 744 aaPredicted RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 MRGPRX2Q96LB1 330 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 NAP1L3Q99457 506 aaPredicted RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 MYOCQ99972 504 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 ADGRE3Q9BY15 652 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 SUSD2Q9UGT4 822 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 RPL26L1Q9UNX3 145 aaKnown RBP12.86□□□□□ -0.35
CCL4-201ENST00000613947 CA5BQ9Y2D0 317 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 COQ6Q9Y2Z9 468 aa12.86□□□□□ -0.35
CCL4-201ENST00000613947 LRRK1Q38SD2 2015 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 PLXNA2O75051 1894 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 SMNDC1O75940 238 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCL4-201ENST00000613947 TM7SF2O76062 418 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 METTL18O95568 372 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 CFIP05156 583 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 ELFN1P0C7U0 828 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 C6P13671 934 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 NQO1P15559 274 aaKnown RBP12.85□□□□□ -0.35
CCL4-201ENST00000613947 LHCGRP22888 699 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 NUDT1P36639 197 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 CSNK1EP49674 416 aaKnown RBP12.85□□□□□ -0.35
CCL4-201ENST00000613947 AFF3P51826 1226 aaKnown RBP12.85□□□□□ -0.35
CCL4-201ENST00000613947 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
CCL4-201ENST00000613947 SF3A2Q15428 464 aaKnown RBP12.85□□□□□ -0.35
CCL4-201ENST00000613947 CSRP2Q16527 193 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 KCTD19Q17RG1 926 aaPredicted RBP12.85□□□□□ -0.35
CCL4-201ENST00000613947 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 SLC23A3Q6PIS1 610 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 LAYNQ6UX15 382 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 LIPIQ6XZB0 460 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 ARHGEF18Q6ZSZ5 1173 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 TSPAN33Q86UF1 283 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 NDUFAF2Q8N183 169 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 GLIS1Q8NBF1 620 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 TMEM145Q8NBT3 493 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 IPMKQ8NFU5 416 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 IFT43Q96FT9 208 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 MLPHQ9BV36 600 aaPredicted RBP12.85□□□□□ -0.35
CCL4-201ENST00000613947 FSCN3Q9NQT6 498 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 AASDHPPTQ9NRN7 309 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 DMTF1Q9Y222 760 aa12.85□□□□□ -0.35
CCL4-201ENST00000613947 DRG1Q9Y295 367 aaKnown RBP12.85□□□□□ -0.35
CCL4-201ENST00000613947 LOC285095A0A1B0GVY8 99 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 GOLGA8CPA6NN73 597 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 PRAMEF26H0Y7S4 382 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 KHNYNO15037 678 aaKnown RBP12.84□□□□□ -0.35
CCL4-201ENST00000613947 RAD51BO15315 384 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 ANXA9O76027 345 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 CYP2A6P11509 494 aaPredicted RBP12.84□□□□□ -0.35
CCL4-201ENST00000613947 ETS1P14921 441 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 HNRNPA2B1P22626 353 aaKnown RBP12.84□□□□□ -0.35
CCL4-201ENST00000613947 NFKBIAP25963 317 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 VIPR1P32241 457 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 GRIA4P48058 902 aa12.84□□□□□ -0.35
CCL4-201ENST00000613947 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms