RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PSME2Q9UL46 239 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 CORINQ9Y5Q5 1042 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 M0QYV0 167 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 KDM1AO60341 852 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 VDRP11473 427 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 RPL17P18621 184 aaKnown RBP21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 WARSP23381 471 aaKnown RBP21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 DPYSL2Q16555 572 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 TMTC4Q5T4D3 741 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 AGAP7PQ5VUJ5 663 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 KIAA0319Q5VV43 1072 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 DDX53Q86TM3 631 aaKnown RBP21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 CPNE9Q8IYJ1 553 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 RTP3Q9BQQ7 232 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 NANOGQ9H9S0 305 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 CLOCKO15516 846 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 SEC14L2O76054 403 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 SRP72O76094 671 aaKnown RBP21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 RASAL1O95294 804 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 EFEMP2O95967 443 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 SOD2P04179 222 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 GNAO1P09471 354 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 OR4Q2P0C623 313 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 FCGR1AP12314 374 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 CAPGP40121 348 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 HNRNPFP52597 415 aaKnown RBP21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 CRADDP78560 199 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 ELAVL2Q12926 359 aaKnown RBP21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 INPP5AQ14642 412 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 CCNYL2Q5T2Q4 361 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 SCYL2Q6P3W7 929 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 GALNT18Q6P9A2 607 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 GK5Q6ZS86 529 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 UNC93AQ86WB7 457 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 TIFAQ96CG3 184 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 MAGED4Q96JG8 741 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 CTRCQ99895 268 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 SLC25A23Q9BV35 468 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 WDR12Q9GZL7 423 aaKnown RBP21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 AGPAT4Q9NRZ5 378 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 GPATCH2LQ9NWQ4 482 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 DAPK2Q9UIK4 370 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 TRIOBPQ9H2D6 2365 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 SZT2Q5T011 3432 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 TSC2P49815 1807 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 ZNF839A8K0R7 811 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 SDHDO14521 159 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 GABRDO14764 452 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 CYP11A1P05108 521 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 GBE1Q04446 702 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 PHKG1Q16816 387 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 OR6B2Q6IFH4 312 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 ZNF773Q6PK81 442 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 PTAR1Q7Z6K3 402 aaPredicted RBP21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 ZC3H7AQ8IWR0 971 aaKnown RBP21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 LSMEM2Q8N112 164 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 TMEM86AQ8N2M4 240 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 KDM1BQ8NB78 822 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 OR10T2Q8NGX3 314 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 STYXQ8WUJ0 223 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 ALPK1Q96QP1 1244 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 FAM124BQ9H5Z6 455 aaPredicted RBP21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 DSEQ9UL01 958 aa21.91■■□□□ 1.1
POLR2J3-220ENST00000613744 CLDN25C9JDP6 229 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 RFXAPO00287 272 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 SYN3O14994 580 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 GRM6O15303 877 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 ZNF182P17025 639 aaPredicted RBP21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 TYMPP19971 482 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 IL10P22301 178 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 ARPP19P56211 112 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 ERVK-21P61565 698 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 IRF9Q00978 393 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 CDO1Q16878 200 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 SPATS1Q496A3 300 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 LRRC8EQ6NSJ5 796 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 FAM183BPQ6ZVS7 135 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 TMEM151AQ8N4L1 468 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 FBXO22Q8NEZ5 403 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 POF1BQ8WVV4 589 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 ROPN1LQ96C74 230 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 CENPNQ96H22 339 aaPredicted RBP21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 PPP1R36Q96LQ0 422 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 GBA3Q9H227 469 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 RWDD3Q9Y3V2 267 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 RAD54BQ9Y620 910 aa21.9■■□□□ 1.1
POLR2J3-220ENST00000613744 EPOPA6NHQ4 379 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 SAC3D1A6NKF1 404 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 MAP3K6O95382 1288 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 SNRPB2P08579 225 aaKnown RBP21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 PAX3P23760 479 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 FASP25445 335 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 GSSP48637 474 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 LHX1P48742 406 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 CA9Q16790 459 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 ANO4Q32M45 955 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 CTXN3Q4LDR2 81 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 RAB6CQ53S08 254 aa21.89■■□□□ 1.1
POLR2J3-220ENST00000613744 PPP1R26Q5T8A7 1209 aaPredicted RBP21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms