RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 CACTIN-AS1Q8N1I8 211 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 CNTD1Q8N815 330 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 FAM46DQ8NEK8 389 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 PDXPQ96GD0 296 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 HIC2Q96JB3 615 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 DESI2Q9BSY9 194 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 BOCQ9BWV1 1114 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 LACRTQ9GZZ8 138 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 ABCG8Q9H221 673 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 TCEAL2Q9H3H9 227 aaPredicted RBP12.29□□□□□ -0.44
CBWD1-221ENST00000613355 DPEP2Q9H4A9 486 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 FAM83DQ9H4H8 585 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 SUDS3Q9H7L9 328 aaPredicted RBP12.29□□□□□ -0.44
CBWD1-221ENST00000613355 MAGEE1Q9HCI5 957 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 HACD3Q9P035 362 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 SIRPGQ9P1W8 387 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 AK5Q9Y6K8 562 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 DUSP10Q9Y6W6 482 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
CBWD1-221ENST00000613355 GRID2IPA4D2P6 1211 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 EME2A4GXA9 379 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 FAM149AA5PLN7 773 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 RCCD1A6NED2 376 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GCATO75600 419 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 CCDC175P0C221 793 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GNPDA1P46926 289 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 MARCKSL1P49006 195 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 SPINT3P49223 89 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GEMP55040 296 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 EIF3EP60228 445 aaKnown RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 PTSQ03393 145 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 NOMO1Q15155 1222 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 TCEA2Q15560 299 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 ZDHHC20Q5W0Z9 365 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 DOK6Q6PKX4 331 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 TECPR1Q7Z6L1 1165 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GALNT13Q8IUC8 556 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 KDF1Q8NAX2 398 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 OR1E3Q8WZA6 343 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GRAMD1AQ96CP6 724 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 TRABDQ9H4I3 376 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 FGF22Q9HCT0 170 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 TRNAU1APQ9NX07 287 aaKnown RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 AAR2Q9Y312 384 aaKnown RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 REXO2Q9Y3B8 237 aaKnown RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 OPA1O60313 960 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 MT-CYBP00156 380 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 MT-CO3P00414 261 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 PRLP01236 227 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 EPOP01588 193 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 IVLP07476 585 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 MMP2P08253 660 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GIMD1P0DJR0 217 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 RBP3P10745 1247 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GM2AP17900 193 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 NFKB1P19838 968 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 HLA-DPA1P20036 260 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 ACTN2P35609 894 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 OTUD4Q01804 1114 aaKnown RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 TARDBPQ13148 414 aaKnown RBP eCLIP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 SPIDRQ14159 915 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 ZNF569Q5MCW4 686 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 PDPK2PQ6A1A2 396 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 CBARPQ8N350 705 aaPredicted RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 SPATA22Q8NHS9 363 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 ACTL9Q8TC94 416 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 OR2M4Q96R27 311 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 FCRL5Q96RD9 977 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 ZSCAN5AQ9BUG6 496 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 RIOK2Q9BVS4 552 aaKnown RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 LGR4Q9BXB1 951 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 SPATA16Q9BXB7 569 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 NRSN2Q9GZP1 204 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 CLPBQ9H078 707 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 STN1Q9H668 368 aaKnown RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 RMI1Q9H9A7 625 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 MRPL40Q9NQ50 206 aaKnown RBP12.28□□□□□ -0.44
CBWD1-221ENST00000613355 UBP1Q9NZI7 540 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 ZMIZ1Q9ULJ6 1067 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GUCA1BQ9UMX6 200 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 ZNF711Q9Y462 761 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 GPSM3Q9Y4H4 160 aa12.28□□□□□ -0.44
CBWD1-221ENST00000613355 LRP4O75096 1905 aa12.27□□□□□ -0.44
CBWD1-221ENST00000613355 TRABD2BA6NFA1 517 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 B4DGG1 531 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 TMX2-CTNND1H3BSU7 103 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 INPP4BO15327 924 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 KCNN4O15554 427 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 TCEA3O75764 348 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 FTCDO95954 541 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 SLC2A4P14672 509 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 RBL1P28749 1068 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 PPM1FP49593 454 aaPredicted RBP12.27□□□□□ -0.45
CBWD1-221ENST00000613355 WNT3AP56704 352 aa12.27□□□□□ -0.45
CBWD1-221ENST00000613355 LRP8Q14114 963 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms