RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 YAF2Q8IY57 180 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 TNS4Q8IZW8 715 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 GPATCH11Q8N954 259 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 ACVR1CQ8NER5 493 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 OR2A12Q8NGT7 310 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 FRS2Q8WU20 508 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 CYB5D2Q8WUJ1 264 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 SORCS1Q8WY21 1168 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 VOPP1Q96AW1 172 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 GRAMD1AQ96CP6 724 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 ELMO2Q96JJ3 720 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 RIPOR3Q96MK2 946 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 LYSMD1Q96S90 227 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 TCF12Q99081 682 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 PITPNM3Q9BZ71 974 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 GPR63Q9BZJ6 419 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 ZFYVE1Q9HBF4 777 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 HPS4Q9NQG7 708 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 FGFR1OP2Q9NVK5 253 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 ELOVL2Q9NXB9 296 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 IL17CQ9P0M4 197 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 MARCH4Q9P2E8 410 aaPredicted RBP8.9□□□□□ -0.98
CCDC47-207ENST00000612558 DEC1Q9P2X7 70 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 CORO1CQ9ULV4 474 aaPredicted RBP8.9□□□□□ -0.98
CCDC47-207ENST00000612558 PLA2G4CQ9UP65 541 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 ACOT9Q9Y305 439 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 PPIL1Q9Y3C6 166 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 PKP3Q9Y446 797 aa8.9□□□□□ -0.98
CCDC47-207ENST00000612558 CAPN8A6NHC0 703 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 OTOL1A6NHN0 477 aaPredicted RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 TTC34A8MYJ7 566 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 EBAG9O00559 213 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 KLF11O14901 512 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 PFDN6O15212 129 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 PLIN3O60664 434 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 TOP3BO95985 862 aaKnown RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 SLC4A1P02730 911 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 BPGMP07738 259 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 NEFHP12036 1026 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 LAMP2P13473 410 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 PSMC3P17980 439 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 HNF1BP35680 557 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 MTHFRP42898 656 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 SLC6A11P48066 632 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 STC1P52823 247 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 TAS2R39P59534 338 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 ST8SIA6P61647 398 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 POLR2LP62875 67 aaKnown RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 DMTNQ08495 405 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 EIF4HQ15056 248 aaKnown RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 ZKSCAN8Q15776 578 aaPredicted RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 TYSND1Q2T9J0 566 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 GAB4Q2WGN9 574 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF789Q5FWF6 425 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 GRAMD4Q6IC98 578 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 GDPD4Q6W3E5 623 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 LYSMD3Q7Z3D4 306 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 CCDC91Q7Z6B0 441 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 LDB1Q86U70 411 aaPredicted RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 NUDCD3Q8IVD9 361 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 CPA6Q8N4T0 437 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 CCDC63Q8NA47 563 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 MYLIPQ8WY64 445 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 ELSPBP1Q96BH3 223 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 SCRN2Q96FV2 425 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 TSPAN17Q96FV3 270 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 LRIG1Q96JA1 1093 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 TSNARE1Q96NA8 513 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 MYADMQ96S97 322 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 OMDQ99983 421 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 HEPHQ9BQS7 1158 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 ZDHHC6Q9H6R6 413 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 INTS10Q9NVR2 710 aaKnown RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 POLR3BQ9NW08 1133 aaPredicted RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 TMEM216Q9P0N5 145 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 SIRPGQ9P1W8 387 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.9□□□□□ -0.99
CCDC47-207ENST00000612558 EMCNQ9ULC0 261 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 VWA7Q9Y334 891 aa8.9□□□□□ -0.99
CCDC47-207ENST00000612558 BRWD1Q9NSI6 2320 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 A0A087X1B8 175 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 C1orf232A0A0U1RR37 186 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 PHGDHO43175 533 aaKnown RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 TBX10O75333 385 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 PROCP04070 461 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 UGT2B4P06133 528 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 APOA4P06727 396 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 SLC35E2BP0CK96 405 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 MC4RP32245 332 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 IRF9Q00978 393 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 PTSQ03393 145 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 DLX2Q07687 328 aaPredicted RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 PEX6Q13608 980 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 RUNX3Q13761 415 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 SEMA3AQ14563 771 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 PTPRRQ15256 657 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 CDKN3Q16667 212 aa8.89□□□□□ -0.99
CCDC47-207ENST00000612558 AARS2Q5JTZ9 985 aaKnown RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 RBM20Q5T481 1227 aaKnown RBP8.89□□□□□ -0.99
CCDC47-207ENST00000612558 RNF187Q5TA31 235 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms