RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TMA16Q96EY4 203 aaKnown RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 KLHL32Q96NJ5 620 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 CYP4F12Q9HCS2 524 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDH1-213ENST00000612417 CACNA2D2Q9NY47 1150 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 TRPM5Q9NZQ8 1165 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 EPS15L1Q9UBC2 864 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 CNOT11Q9UKZ1 510 aaKnown RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 GBF1Q92538 1859 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 LOC285095A0A1B0GVY8 99 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 ZNF840PA6NDX5 716 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 UBDO15205 165 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 S1PR4O95977 384 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 C8BP07358 591 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 HMGA1P17096 107 aaKnown RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 GRIA2P42262 883 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 ATP4BP51164 291 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 TRIM25Q14258 630 aaKnown RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 IHHQ14623 411 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 CNPY1Q3B7I2 92 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 HECTD3Q5T447 861 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 RAP1GAP2Q684P5 730 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 TFAP2DQ7Z6R9 452 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 UBE2Q1Q7Z7E8 422 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 COPS7BQ9H9Q2 264 aaPredicted RBP14.69□□□□□ -0.06
CDH1-213ENST00000612417 SP110Q9HB58 689 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 SLC4A7Q9Y6M7 1214 aa14.69□□□□□ -0.06
CDH1-213ENST00000612417 PSMD12O00232 456 aaPredicted RBP14.68□□□□□ -0.06
CDH1-213ENST00000612417 TXNDC9O14530 226 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 TRIM24O15164 1050 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 ATXN1LP0C7T5 689 aaKnown RBP14.68□□□□□ -0.06
CDH1-213ENST00000612417 HOXB8P17481 243 aaPredicted RBP14.68□□□□□ -0.06
CDH1-213ENST00000612417 SYN1P17600 705 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 MSX2P35548 267 aaPredicted RBP14.68□□□□□ -0.06
CDH1-213ENST00000612417 EPHB3P54753 998 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 POLE2P56282 527 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 MAXP61244 160 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 HTRA4P83105 476 aaPredicted RBP14.68□□□□□ -0.06
CDH1-213ENST00000612417 DSC2Q02487 901 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 FASTKQ14296 549 aaKnown RBP14.68□□□□□ -0.06
CDH1-213ENST00000612417 TMEM240Q5SV17 173 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 FAM45BPQ6NSW5 357 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 HACD2Q6Y1H2 254 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 ISCA2Q86U28 154 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 RNF135Q8IUD6 432 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 RNF148Q8N7C7 305 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 TMEM102Q8N9M5 508 aaPredicted RBP14.68□□□□□ -0.06
CDH1-213ENST00000612417 ARRDC2Q8TBH0 407 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 FAM45AQ8TCE6 357 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 OVCA2Q8WZ82 227 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 TRIM4Q9C037 500 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 TRPC7Q9HCX4 862 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 NDUFA13Q9P0J0 144 aa14.68□□□□□ -0.06
CDH1-213ENST00000612417 SMIM31A0A1B0GVY4 71 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 FBP2O00757 339 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 LDB2O43679 373 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 CXCL14O95715 111 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 CRTAMO95727 393 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 SMIM18P0DKX4 95 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 GSTT1P30711 240 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 ACADVLP49748 655 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 ARSDP51689 593 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 KCNQ1P51787 676 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 CDKN2DP55273 166 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 CREMQ03060 361 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 RING1Q06587 406 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 TRAP1Q12931 704 aaKnown RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 ALFQ53S48 1182 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 SIRPB2Q5JXA9 342 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 ZNF678Q5SXM1 525 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 REP15Q6BDI9 236 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 C8orf82Q6P1X6 216 aaPredicted RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 PSRC1Q6PGN9 363 aaPredicted RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 TMEM207Q6UWW9 146 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 CYHR1Q6ZMK1 362 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PTAR1Q7Z6K3 402 aaPredicted RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 DNAJB7Q7Z6W7 309 aaPredicted RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 RIN3Q8TB24 985 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 HDAC10Q969S8 669 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PSMG2Q969U7 264 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PABPC5Q96DU9 382 aaKnown RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 KLHL5Q96PQ7 755 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PKP2Q99959 881 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 SLC25A23Q9BV35 468 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 TRAF6Q9Y4K3 522 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 INSL5Q9Y5Q6 135 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 AP4B1Q9Y6B7 739 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 H0YJX3 145 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 UBFD1O14562 309 aaKnown RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 TLL1O43897 1013 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 CNTN5O94779 1100 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 IGLV3-27P01718 113 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 SNRPB2P08579 225 aaKnown RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 FDXRP22570 491 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PMLP29590 882 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PLK1P53350 603 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PRAMEP78395 509 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 CREB5Q02930 508 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 IL10RBQ08334 325 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 ITKQ08881 620 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms