RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SEPT10Q9P0V9 454 aa17.72■□□□□ 0.43
SSBP1-215ENST00000612337 B8ZZF3 427 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 J3QKU1 62 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 MYO1FO00160 1098 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 AGRPO00253 132 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 MFSD11O43934 449 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 SOD1P00441 154 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 SERPING1P05155 500 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 PDHA1P08559 390 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 CD48P09326 243 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 CD82P27701 267 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 ALDH4A1P30038 563 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 PBX1P40424 430 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 GARSP41250 739 aaKnown RBP17.71■□□□□ 0.43
SSBP1-215ENST00000612337 MAPK10P53779 464 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 MMRN1Q13201 1228 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 C16orf72Q14CZ0 275 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 LRRC66Q68CR7 880 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 ALG1LQ6GMV1 187 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 ADAMTSL4Q6UY14 1074 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 NLRP8Q86W28 1048 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 NAGSQ8N159 534 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 MAML1Q92585 1016 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 AP2M1Q96CW1 435 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 SGF29Q96ES7 293 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 FUCA2Q9BTY2 467 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 CDH19Q9H159 772 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 ABCG8Q9H221 673 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 FOXJ2Q9P0K8 574 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 CD84Q9UIB8 345 aa17.71■□□□□ 0.43
SSBP1-215ENST00000612337 A0A087X0T9 212 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 A0A0J9YYE9 177 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 A0A0U1RQS6 177 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 C9orf172C9J069 976 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 HGSO14964 777 aaPredicted RBP17.7■□□□□ 0.42
SSBP1-215ENST00000612337 TRBC1P01850 177 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 PYGLP06737 847 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 FAM228BP0C875 321 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 ZNF30P17039 623 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 CES1P23141 567 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 CD1CP29017 333 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 ARSEP51690 589 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 FANCCQ00597 558 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 PTSQ03393 145 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 ITKQ08881 620 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 GALNT2Q10471 571 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 SRSF6Q13247 344 aaKnown RBP17.7■□□□□ 0.42
SSBP1-215ENST00000612337 BIRC2Q13490 618 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 HADHQ16836 314 aaKnown RBP17.7■□□□□ 0.42
SSBP1-215ENST00000612337 CCDC122Q5T0U0 273 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 DOK6Q6PKX4 331 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 ZNF574Q6ZN55 896 aaPredicted RBP17.7■□□□□ 0.42
SSBP1-215ENST00000612337 RFLNAQ6ZTI6 216 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 USP53Q70EK8 1073 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 ZNF765Q7L2R6 523 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 ZFAND4Q86XD8 727 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 DTX1Q86Y01 620 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 PATE1Q8WXA2 126 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 NUDT22Q9BRQ3 303 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 PCDHB11Q9Y5F2 797 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 SPTA1P02549 2419 aa17.7■□□□□ 0.42
SSBP1-215ENST00000612337 TLN1Q9Y490 2541 aaKnown RBP17.69■□□□□ 0.42
SSBP1-215ENST00000612337 IGHV5-10-1A0A0J9YXX1 117 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 MATN3O15232 486 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 ACTR1BP42025 376 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 SSR1P43307 286 aaKnown RBP17.69■□□□□ 0.42
SSBP1-215ENST00000612337 ACTR1AP61163 376 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 ZBED6P86452 979 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 DPYSL3Q14195 570 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 PAFAH1B3Q15102 231 aaKnown RBP17.69■□□□□ 0.42
SSBP1-215ENST00000612337 MANEAQ5SRI9 462 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 TMEM164Q5U3C3 297 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 NCBP2-AS2Q69YL0 99 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 TIGD7Q6NT04 549 aaPredicted RBP17.69■□□□□ 0.42
SSBP1-215ENST00000612337 ALKBH5Q6P6C2 394 aaKnown RBP17.69■□□□□ 0.42
SSBP1-215ENST00000612337 SCAMP4Q969E2 229 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 FATE1Q969F0 183 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 IQCDQ96DY2 449 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 SMIM14Q96QK8 99 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 OR2M4Q96R27 311 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 HAUS2Q9NVX0 235 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 AMACRQ9UHK6 382 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 DNPEPQ9ULA0 475 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 CAPN11Q9UMQ6 739 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 TMEM98Q9Y2Y6 226 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 PLEKHM1Q9Y4G2 1056 aa17.69■□□□□ 0.42
SSBP1-215ENST00000612337 ZFC3H1O60293 1989 aaKnown RBP17.68■□□□□ 0.42
SSBP1-215ENST00000612337 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.68■□□□□ 0.42
SSBP1-215ENST00000612337 PPM1DO15297 605 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 ITGB2P05107 769 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 CCNCP24863 283 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 STC1P52823 247 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 EPHB1P54762 984 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 TPM4P67936 248 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 SQSTM1Q13501 440 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 TRA2AQ13595 282 aaKnown RBP eCLIP17.68■□□□□ 0.42
SSBP1-215ENST00000612337 IHHQ14623 411 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 NFKBIBQ15653 356 aa17.68■□□□□ 0.42
SSBP1-215ENST00000612337 IFI16Q16666 785 aaKnown RBP17.68■□□□□ 0.42
SSBP1-215ENST00000612337 PYCR3Q53H96 274 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms