RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ITGB8P26012 769 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 GABRR2P28476 465 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 MC4RP32245 332 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 SETMARQ53H47 684 aaPredicted RBP27.96■■■□□ 2.07
CSPG5-205ENST00000610462 PELI3Q8N2H9 469 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 FAM136AQ96C01 138 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 ANGPTL2Q9UKU9 493 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 H3BMM5 538 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 UBFD1O14562 309 aaKnown RBP27.96■■■□□ 2.07
CSPG5-205ENST00000610462 FZD6O60353 706 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 TIMP1P01033 207 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 CDKN1CP49918 316 aaPredicted RBP27.96■■■□□ 2.07
CSPG5-205ENST00000610462 INHBCP55103 352 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 PAQR3Q6TCH7 311 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 LRRC74BQ6ZQY2 392 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 NRG4Q8WWG1 115 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 EXT2Q93063 718 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 MARK4Q96L34 752 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 ATOH8Q96SQ7 321 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 DERL2Q9GZP9 239 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 GEMIN8Q9NWZ8 242 aaKnown RBP27.96■■■□□ 2.07
CSPG5-205ENST00000610462 TRAF6Q9Y4K3 522 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 PTPRSQ13332 1948 aa27.96■■■□□ 2.07
CSPG5-205ENST00000610462 PFDN6O15212 129 aa27.95■■■□□ 2.07
CSPG5-205ENST00000610462 FKBP6O75344 327 aa27.95■■■□□ 2.07
CSPG5-205ENST00000610462 PDE5AO76074 875 aa27.95■■■□□ 2.07
CSPG5-205ENST00000610462 CYP4F8P98187 520 aa27.95■■■□□ 2.07
CSPG5-205ENST00000610462 PSAPL1Q6NUJ1 521 aa27.95■■■□□ 2.07
CSPG5-205ENST00000610462 RAB44Q7Z6P3 723 aaPredicted RBP27.95■■■□□ 2.07
CSPG5-205ENST00000610462 FBXW8Q8N3Y1 598 aa27.95■■■□□ 2.07
CSPG5-205ENST00000610462 PTGR2Q8N8N7 351 aaPredicted RBP27.95■■■□□ 2.07
CSPG5-205ENST00000610462 MRPS31Q92665 395 aaKnown RBP27.95■■■□□ 2.07
CSPG5-205ENST00000610462 YME1L1Q96TA2 773 aa27.95■■■□□ 2.07
CSPG5-205ENST00000610462 CXorf56Q9H5V9 222 aa27.95■■■□□ 2.07
CSPG5-205ENST00000610462 H7C0S8 307 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 AIM2O14862 343 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 TTPAP49638 278 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 NUDT2P50583 147 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 AP2B1P63010 937 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 C16orf89Q6UX73 402 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 CHSY3Q70JA7 882 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 GAREM2Q75VX8 874 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 MFN1Q8IWA4 741 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 PIANPQ8IYJ0 282 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 KIAA1191Q96A73 305 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 ZBP1Q9H171 429 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 BPIFA1Q9NP55 256 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 FAM50BQ9Y247 325 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 WASF2Q9Y6W5 498 aa27.95■■■□□ 2.06
CSPG5-205ENST00000610462 LCHNA4D1U4 455 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 UBXN8O00124 270 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 MTHFD2P13995 350 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 C1QTNF8P60827 252 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 RAD51Q06609 339 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 PTPRRQ15256 657 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 PTPRNQ16849 979 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 ATXN7L2Q5T6C5 722 aaPredicted RBP27.94■■■□□ 2.06
CSPG5-205ENST00000610462 AAGABQ6PD74 315 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 KYQ8NBH2 561 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 NAF1Q96HR8 494 aaKnown RBP27.94■■■□□ 2.06
CSPG5-205ENST00000610462 BIRC8Q96P09 236 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 ASB2Q96Q27 587 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 MRGBPQ9NV56 204 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 PCDHB9Q9Y5E1 797 aa27.94■■■□□ 2.06
CSPG5-205ENST00000610462 OAS3Q9Y6K5 1087 aaKnown RBP27.94■■■□□ 2.06
CSPG5-205ENST00000610462 NVLO15381 856 aaKnown RBP27.93■■■□□ 2.06
CSPG5-205ENST00000610462 TGM5O43548 720 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 CNPP09543 421 aaKnown RBP27.93■■■□□ 2.06
CSPG5-205ENST00000610462 ANPEPP15144 967 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 MTTPP55157 894 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 ATP6V0D1P61421 351 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 AP1S1P61966 158 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 LRRC26Q2I0M4 334 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 CMPK2Q5EBM0 449 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 BHMTQ93088 406 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 BEGAINQ9BUH8 593 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 KERAO60938 352 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 MT-CO1P00395 513 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 PYGLP06737 847 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 CTSAP10619 480 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 PKMP14618 531 aaKnown RBP27.93■■■□□ 2.06
CSPG5-205ENST00000610462 CA8P35219 290 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 SLC7A9P82251 487 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 ZRANB3Q5FWF4 1079 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 HTR3DQ70Z44 454 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 HS6ST3Q8IZP7 471 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 APCDD1Q8J025 514 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 MAB21L3Q8N8X9 362 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 STAG3L4Q8TBR4 150 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 DDI1Q8WTU0 396 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 USP13Q92995 863 aaPredicted RBP27.93■■■□□ 2.06
CSPG5-205ENST00000610462 GPR21Q99679 349 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 C2orf49Q9BVC5 232 aaPredicted RBP27.93■■■□□ 2.06
CSPG5-205ENST00000610462 NMRK1Q9NWW6 199 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 STK39Q9UEW8 545 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 PRPF19Q9UMS4 504 aaKnown RBP27.93■■■□□ 2.06
CSPG5-205ENST00000610462 ZNF510Q9Y2H8 683 aa27.93■■■□□ 2.06
CSPG5-205ENST00000610462 FGF18O76093 207 aa27.92■■■□□ 2.06
CSPG5-205ENST00000610462 SORBS2O94875 1100 aaKnown RBP27.92■■■□□ 2.06
CSPG5-205ENST00000610462 CKMP06732 381 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms