RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 FAM45BPQ6NSW5 357 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 KLHDC8BQ8IXV7 354 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
CTCFL-213ENST00000607923 CLYBLQ8N0X4 340 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 OR4L1Q8NH43 312 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 ZFP28Q8NHY6 868 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 FAM45AQ8TCE6 357 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 FAR2Q96K12 515 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 PRICKLE1Q96MT3 831 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-213ENST00000607923 ERVK-6Q9BXR3 956 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 GPR62Q9BZJ7 368 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 CCDC68Q9H2F9 335 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 POLR3BQ9NW08 1133 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-213ENST00000607923 TMEM248Q9NWD8 314 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 SCML2Q9UQR0 700 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 PCDHB5Q9Y5E4 795 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 COMMD10Q9Y6G5 202 aa13.74□□□□□ -0.21
CTCFL-213ENST00000607923 MROH6A6NGR9 719 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 IQCF5A8MTL0 148 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 NME4O00746 187 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 AZIN1O14977 448 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 OR1I1O60431 355 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 NDST2P52849 883 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 TIAL1Q01085 375 aaKnown RBP eCLIP13.73□□□□□ -0.21
CTCFL-213ENST00000607923 RHDQ02161 417 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 RFTN1Q14699 578 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-213ENST00000607923 MFSD14CQ5VZR4 134 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 MRNIPQ6NTE8 343 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 MSANTD2Q6P1R3 559 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 LINGO4Q6UY18 593 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 PAF1Q8N7H5 531 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 CATSPER1Q8NEC5 780 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 UPF1Q92900 1129 aaKnown RBP eCLIP13.73□□□□□ -0.21
CTCFL-213ENST00000607923 SLC30A3Q99726 388 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 CCT7Q99832 543 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 TUBB1Q9H4B7 451 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 VPS28Q9UK41 221 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 RNF11Q9Y3C5 154 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 BTN3A1O00481 513 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 SOCS2O14508 198 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 TRIM24O15164 1050 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 VILLO15195 856 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 HSPA1AP0DMV8 641 aaKnown RBP13.73□□□□□ -0.21
CTCFL-213ENST00000607923 HSPA1BP0DMV9 641 aaKnown RBP13.73□□□□□ -0.21
CTCFL-213ENST00000607923 CYBAP13498 195 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 ZNF37AP17032 561 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-213ENST00000607923 IKBKEQ14164 716 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 DSC3Q14574 896 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 RBBP7Q16576 425 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 RABL3Q5HYI8 236 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 TBCELQ5QJ74 424 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 NADSYN1Q6IA69 706 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 RASAL3Q86YV0 1011 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 TICAM1Q8IUC6 712 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 LPCAT1Q8NF37 534 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 BTN2A3PQ96KV6 586 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 NSMCE3Q96MG7 304 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 GPR21Q99679 349 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 FBXO44Q9H4M3 255 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 ARNT2Q9HBZ2 717 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 SUCOQ9UBS9 1254 aaKnown RBP13.73□□□□□ -0.21
CTCFL-213ENST00000607923 SH3BP1Q9Y3L3 701 aa13.73□□□□□ -0.21
CTCFL-213ENST00000607923 CBX4O00257 560 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 ITGB6P18564 788 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 RPL17P18621 184 aaKnown RBP13.72□□□□□ -0.21
CTCFL-213ENST00000607923 GPX3P22352 226 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 PRKCZQ05513 592 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 SERINC3Q13530 473 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 UGT3A1Q6NUS8 523 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 IFNL1Q8IU54 200 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 ZNF683Q8IZ20 524 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 FBXO39Q8N4B4 442 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 RNF217Q8TC41 542 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 SOCS4Q8WXH5 440 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 TEX37Q96LM6 180 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 TMEM74Q96NL1 305 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 UPF3AQ9H1J1 476 aaKnown RBP13.72□□□□□ -0.21
CTCFL-213ENST00000607923 SOX17Q9H6I2 414 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-213ENST00000607923 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 MAP10Q9P2G4 905 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 MKI67P46013 3256 aaKnown RBP13.72□□□□□ -0.21
CTCFL-213ENST00000607923 ARHGAP10A1A4S6 786 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 TLR5O60602 858 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 NIPSNAP2O75323 286 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 NDUFS3O75489 264 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 MYCP01106 439 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-213ENST00000607923 MTHFD2P13995 350 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 INHBEP58166 350 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 PTPRNQ16849 979 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 SAMD4BQ5PRF9 694 aaKnown RBP13.72□□□□□ -0.21
CTCFL-213ENST00000607923 RSPO2Q6UXX9 243 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-213ENST00000607923 RNF19BQ6ZMZ0 732 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 GLT6D1Q7Z4J2 308 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 SIDT2Q8NBJ9 832 aaKnown RBP13.72□□□□□ -0.21
CTCFL-213ENST00000607923 PBXIP1Q96AQ6 731 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 C1orf74Q96LT6 269 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 RANBP9Q96S59 729 aa13.72□□□□□ -0.21
CTCFL-213ENST00000607923 SLAMF8Q9P0V8 285 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms