RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 SCAMP4Q969E2 229 aa14.56□□□□□ -0.08
LTBP4-228ENST00000600499 FUBP1Q96AE4 644 aaKnown RBP14.56□□□□□ -0.08
LTBP4-228ENST00000600499 AP2M1Q96CW1 435 aa14.56□□□□□ -0.08
LTBP4-228ENST00000600499 CAPZA3Q96KX2 299 aa14.56□□□□□ -0.08
LTBP4-228ENST00000600499 TBATAQ96M53 351 aa14.56□□□□□ -0.08
LTBP4-228ENST00000600499 GPR63Q9BZJ6 419 aa14.56□□□□□ -0.08
LTBP4-228ENST00000600499 FAM83DQ9H4H8 585 aa14.56□□□□□ -0.08
LTBP4-228ENST00000600499 CASS4Q9NQ75 786 aa14.56□□□□□ -0.08
LTBP4-228ENST00000600499 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.56□□□□□ -0.08
LTBP4-228ENST00000600499 SHOC2Q9UQ13 582 aa14.56□□□□□ -0.08
LTBP4-228ENST00000600499 K7ESM1 405 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 TNFRSF10CO14798 259 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 SLC30A4O14863 429 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 USP12O75317 370 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 CSF2P04141 144 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 PCCBP05166 539 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 BPIP17213 487 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 SDHBP21912 280 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 ATXN3P54252 364 aaPredicted RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 PDE1BQ01064 536 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 CDH17Q12864 832 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 EIF2B5Q13144 721 aaKnown RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 PDE1CQ14123 709 aaPredicted RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 KCNJ11Q14654 390 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 NFATC4Q14934 902 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 DENND2CQ68D51 928 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 SYDE1Q6ZW31 735 aaPredicted RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 KANSL1Q7Z3B3 1105 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 GLT6D1Q7Z4J2 308 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 PARGQ86W56 976 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 GPR26Q8NDV2 337 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 COX14Q96I36 57 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 C16orf45Q96MC5 204 aaPredicted RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 APOL2Q9BQE5 337 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 RIOK2Q9BVS4 552 aaKnown RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 DDX47Q9H0S4 455 aaKnown RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 IL21RQ9HBE5 538 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 RIMKLBQ9ULI2 386 aa14.55□□□□□ -0.08
LTBP4-228ENST00000600499 CNOT6Q9ULM6 557 aaKnown RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 FNDC3AQ9Y2H6 1198 aaKnown RBP14.55□□□□□ -0.08
LTBP4-228ENST00000600499 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.54□□□□□ -0.08
LTBP4-228ENST00000600499 C4orf47A7E2U8 309 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 AP3B1O00203 1094 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 LDB2O43679 373 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 ECEL1O95672 775 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 GAS8O95995 478 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 APRTP07741 180 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 MYCLP1P12525 358 aaPredicted RBP14.54□□□□□ -0.08
LTBP4-228ENST00000600499 CD59P13987 128 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 NME1P15531 152 aaKnown RBP14.54□□□□□ -0.08
LTBP4-228ENST00000600499 LPOP22079 712 aaPredicted RBP14.54□□□□□ -0.08
LTBP4-228ENST00000600499 ARRB1P49407 418 aaPredicted RBP14.54□□□□□ -0.08
LTBP4-228ENST00000600499 CDK3Q00526 305 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 PTK6Q13882 451 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 ARMC3Q5W041 872 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 KDM7AQ6ZMT4 941 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 TRAM1L1Q8N609 369 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 BLOC1S5Q8TDH9 187 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 SAP25Q8TEE9 199 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 SCARF2Q96GP6 870 aaPredicted RBP14.54□□□□□ -0.08
LTBP4-228ENST00000600499 RANBP9Q96S59 729 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 AGAP2Q99490 1192 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 ZSCAN5AQ9BUG6 496 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 GTPBP2Q9BX10 602 aaKnown RBP14.54□□□□□ -0.08
LTBP4-228ENST00000600499 WDR26Q9H7D7 661 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 TM7SF3Q9NS93 570 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 DLL3Q9NYJ7 618 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 CDC23Q9UJX2 597 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 PNMA8BQ9ULN7 279 aaPredicted RBP14.54□□□□□ -0.08
LTBP4-228ENST00000600499 OR1A2Q9Y585 309 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 DGKBQ9Y6T7 804 aa14.54□□□□□ -0.08
LTBP4-228ENST00000600499 CFAP54Q96N23 3096 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 LRP4O75096 1905 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 ZNF106Q9H2Y7 1883 aaKnown RBP14.53□□□□□ -0.08
LTBP4-228ENST00000600499 MROH6A6NGR9 719 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 C2orf81A6NN90 581 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 AGAP14A8MT82 685 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 E7EVH7 732 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 H7C0S8 307 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 CACNB4O00305 520 aaPredicted RBP14.53□□□□□ -0.08
LTBP4-228ENST00000600499 CRTAMO95727 393 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 KELP23276 732 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 IVDP26440 423 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 HTR1BP28222 390 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 EPHA8P29322 1005 aaPredicted RBP14.53□□□□□ -0.08
LTBP4-228ENST00000600499 GRIA1P42261 906 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 GPR1P46091 355 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 CCT8P50990 548 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 ZNF140P52738 457 aaPredicted RBP14.53□□□□□ -0.08
LTBP4-228ENST00000600499 THOP1P52888 689 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 GPS1Q13098 491 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 TUBB2AQ13885 445 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 RAET1GQ6H3X3 334 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 ZNF534Q76KX8 674 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 PIP4P1Q86T03 277 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 MCUQ8NE86 351 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 SPATA4Q8NEY3 305 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 OR52K1Q8NGK4 314 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 OR2I1PQ8NGU4 316 aa14.53□□□□□ -0.08
LTBP4-228ENST00000600499 CPT1BQ92523 772 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms