RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PPP1R21Q6ZMI0 780 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 ARMCX6Q7L4S7 300 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 TMC3Q7Z5M5 1100 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 PPIL6Q8IXY8 311 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 MCUQ8NE86 351 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 BLOC1S5Q8TDH9 187 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 DNASE2BQ8WZ79 361 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 SLC17A9Q9BYT1 436 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 TRIM31Q9BZY9 425 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 TRABDQ9H4I3 376 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 SHOC2Q9UQ13 582 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 SLCO1B1Q9Y6L6 691 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 MAST4O15021 2626 aa18.83■□□□□ 0.6
CCDC9-205ENST00000600117 SCN8AQ9UQD0 1980 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 A0A1W2PPC4 97 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 MEI4A8MW99 385 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 BHMG1C9JSJ3 638 aaPredicted RBP18.82■□□□□ 0.6
CCDC9-205ENST00000600117 RECQL5O94762 991 aaPredicted RBP18.82■□□□□ 0.6
CCDC9-205ENST00000600117 SEC31AO94979 1220 aaKnown RBP18.82■□□□□ 0.6
CCDC9-205ENST00000600117 TPH1P17752 444 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 LYSMD4Q5XG99 296 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 RFLNAQ6ZTI6 216 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 TECPR1Q7Z6L1 1165 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 SNF8Q96H20 258 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 KLF6Q99612 283 aaPredicted RBP18.82■□□□□ 0.6
CCDC9-205ENST00000600117 ZFYVE1Q9HBF4 777 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 EIF2B4Q9UI10 523 aaKnown RBP18.82■□□□□ 0.6
CCDC9-205ENST00000600117 SNX24Q9Y343 169 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 GPSM3Q9Y4H4 160 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 PLXNA2O75051 1894 aa18.82■□□□□ 0.6
CCDC9-205ENST00000600117 ADAMTS9Q9P2N4 1935 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 RAD51BO15315 384 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 SLC31A1O15431 190 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 LZTS3O60299 673 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-205ENST00000600117 PAK4O96013 591 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-205ENST00000600117 ENGP17813 658 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 ITPKAP23677 461 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 CD27P26842 260 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 MAOBP27338 520 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 NUDT1P36639 197 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 ACOX1Q15067 660 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 SETMARQ53H47 684 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-205ENST00000600117 SOWAHCQ53LP3 525 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-205ENST00000600117 CERCAMQ5T4B2 595 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 DENND2CQ68D51 928 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 HIBCHQ6NVY1 386 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-205ENST00000600117 LRRC8BQ6P9F7 803 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 Q6ZVL8 140 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 PCGF5Q86SE9 256 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 CAND1Q86VP6 1230 aaKnown RBP18.81■□□□□ 0.6
CCDC9-205ENST00000600117 HOOK3Q86VS8 718 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 SYT12Q8IV01 421 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 RAVER1Q8IY67 606 aaKnown RBP18.81■□□□□ 0.6
CCDC9-205ENST00000600117 DNAAF3Q8N9W5 541 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 TP53I13Q8NBR0 393 aaPredicted RBP18.81■□□□□ 0.6
CCDC9-205ENST00000600117 C1orf216Q8TAB5 229 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 BRSK1Q8TDC3 778 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 SNX19Q92543 992 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 DTD2Q96FN9 168 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 GPR63Q9BZJ6 419 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 DPH5Q9H2P9 285 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 GRHL1Q9NZI5 618 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 DMTF1Q9Y222 760 aa18.81■□□□□ 0.6
CCDC9-205ENST00000600117 ASXL3Q9C0F0 2248 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 MLNP12872 115 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 ETV3P41162 512 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 DPP6P42658 865 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 MAGEA3P43357 314 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 ITGA8P53708 1063 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 SLC7A5Q01650 507 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 SGCGQ13326 291 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 POU6F1Q14863 301 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 MORF4L2Q15014 288 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 TAF1AQ15573 450 aaPredicted RBP18.8■□□□□ 0.6
CCDC9-205ENST00000600117 WSCD2Q2TBF2 565 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 WDR45BQ5MNZ6 344 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 SLC23A3Q6PIS1 610 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 GLT6D1Q7Z4J2 308 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 PDZD3Q86UT5 571 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 CENPTQ96BT3 561 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 LENG8Q96PV6 779 aaPredicted RBP18.8■□□□□ 0.6
CCDC9-205ENST00000600117 RAB17Q9H0T7 212 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 FZD3Q9NPG1 666 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 IL17CQ9P0M4 197 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 WHRNQ9P202 907 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 UTP11Q9Y3A2 253 aaKnown RBP18.8■□□□□ 0.6
CCDC9-205ENST00000600117 KCTD3Q9Y597 815 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 ARL5AQ9Y689 179 aa18.8■□□□□ 0.6
CCDC9-205ENST00000600117 GOLGA8CPA6NN73 597 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 GOLGA8MH3BSY2 632 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 WNT9AO14904 365 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 LDB2O43679 373 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 SLC4A1P02730 911 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 HNRNPA2B1P22626 353 aaKnown RBP18.79■□□□□ 0.6
CCDC9-205ENST00000600117 HMGCLP35914 325 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 SPINT3P49223 89 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 TRADDQ15628 312 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 GLE1Q53GS7 698 aaKnown RBP18.79■□□□□ 0.6
CCDC9-205ENST00000600117 PEAR1Q5VY43 1037 aaPredicted RBP18.79■□□□□ 0.6
CCDC9-205ENST00000600117 CHCHD4Q8N4Q1 142 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms