RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	APOL2	Q9BQE5	337 aa		11.33	□□□□□ -0.59
SUPT5H-216	ENST00000599335	EMILIN2	Q9BXX0	1053 aa		11.33	□□□□□ -0.59
SUPT5H-216	ENST00000599335	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.33	□□□□□ -0.59
SUPT5H-216	ENST00000599335	ARHGEF4	Q9NR80	690 aa		11.33	□□□□□ -0.59
SUPT5H-216	ENST00000599335	MARCO	Q9UEW3	520 aa	Predicted RBP	11.33	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SNX6	Q9UNH7	406 aa		11.33	□□□□□ -0.59
SUPT5H-216	ENST00000599335	SNX10	Q9Y5X0	201 aa		11.33	□□□□□ -0.59
SUPT5H-216	ENST00000599335	HIDE1	A8MVS5	230 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335		E7ESA3	106 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	AGR2	O95994	175 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GLUD1	P00367	558 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PSMB4	P28070	264 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PPM1A	P35813	382 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TAF1B	Q53T94	588 aa	Predicted RBP	11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CES5A	Q6NT32	575 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	UNC5A	Q6ZN44	842 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	STRADA	Q7RTN6	431 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TP53INP2	Q8IXH6	220 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	UNC5B	Q8IZJ1	945 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MINDY2	Q8NBR6	621 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PTCD2	Q8WV60	388 aa	Known RBP	11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SLC44A1	Q8WWI5	657 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	INPP5D	Q92835	1189 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	AZIN2	Q96A70	460 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TAMM41	Q96BW9	452 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	INTS12	Q96CB8	462 aa	Known RBP	11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	NOL6	Q9H6R4	1146 aa	Known RBP	11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	COQ3	Q9NZJ6	369 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ZFP69B	Q9UJL9	534 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	AP3M1	Q9Y2T2	418 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	GPC4	O75487	556 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SAT1	P21673	171 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MGAT1	P26572	445 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	BMPR1A	P36894	532 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ABCG1	P45844	678 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PDK1	Q15118	436 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PDZD4	Q76G19	769 aa	Predicted RBP	11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	OTOA	Q7RTW8	1153 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FAM35A	Q86V20	835 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CACUL1	Q86Y37	369 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	KBTBD2	Q8IY47	623 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CADM3	Q8N126	398 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TTL	Q8NG68	377 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	OR6P1	Q8NGX9	317 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	P2RY11	Q96G91	374 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	VPS39	Q96JC1	886 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MLPH	Q9BV36	600 aa	Predicted RBP	11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TRIM55	Q9BYV6	548 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	VPS11	Q9H270	941 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TLR9	Q9NR96	1032 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335	UBP1	Q9NZI7	540 aa		11.33	□□□□□ -0.6
SUPT5H-216	ENST00000599335		A8MU76	341 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	KPNA5	O15131	536 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TYROBP	O43914	113 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TIPRL	O75663	272 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MFN2	O95140	757 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ADH1A	P07327	375 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RFC2	P35250	354 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CAPZA2	P47755	286 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MGAT3	Q09327	533 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MGAT5	Q09328	741 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	UGP2	Q16851	508 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FUT11	Q495W5	492 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CMPK2	Q5EBM0	449 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ACSBG2	Q5FVE4	666 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FAM209B	Q5JX69	171 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RTP2	Q5QGT7	225 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	DCLRE1A	Q6PJP8	1040 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RTL10	Q7L3V2	364 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SMG7	Q92540	1137 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CELF6	Q96J87	481 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MNT	Q99583	582 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	MECR	Q9BV79	373 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	WDCP	Q9H6R7	721 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PIGV	Q9NUD9	493 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SLC17A6	Q9P2U8	582 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	SI	P14410	1827 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TPR	P12270	2363 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ARHGAP33	O14559	1287 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	EDF1	O60869	148 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	WARS	P23381	471 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PBLD	P30039	288 aa	Predicted RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	LHX1	P48742	406 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ERVFC1	P60507	584 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PLIN5	Q00G26	463 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	DSG1	Q02413	1049 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CDC16	Q13042	620 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CGB2	Q6NT52	195 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	OTOP3	Q7RTS5	596 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	CRTAC1	Q9NQ79	661 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	FZD10	Q9ULW2	581 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	URB1	O60287	2271 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335		A0A0A0MRY4	1105 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RHOBTB1	O94844	696 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	TMEM11	P17152	192 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	PTPN2	P17706	415 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	ERCC2	P18074	760 aa		11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	RPL9	P32969	192 aa	Known RBP	11.32	□□□□□ -0.6
SUPT5H-216	ENST00000599335	NUP107	P57740	925 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms