RNA–Protein interactions for RNA: ENST00000598249.5

SPTBN4-212, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPTBN4, Length 8,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-212ENST00000598249 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 PPP3R2Q96LZ3 170 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 DGCR6LQ9BY27 220 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 C2CD2Q9Y426 696 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 LOXHD1Q8IVV2 1947 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 NRXN1Q9ULB1 1477 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 SIN3BO75182 1162 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 TRIM3O75382 744 aaPredicted RBP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 TCEA3O75764 348 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 CHN2P52757 468 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 OC90Q02509 493 aaPredicted RBP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 MPP2Q14168 576 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 ANXA8L1Q5VT79 327 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 CXXC5Q7LFL8 322 aaKnown RBP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 AMIGO1Q86WK6 493 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 MINDY2Q8NBR6 621 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 ACAT2Q9BWD1 397 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 DCLK1O15075 740 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 OCLNQ16625 522 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 DLG3Q92796 817 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 RBM18Q96H35 190 aaKnown RBP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 HSFY1Q96LI6 401 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 EPB41L1Q9H4G0 881 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 SMIM35A0A1B0GVV1 85 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 ATF6P18850 670 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 CASP6P55212 293 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 TNFAIP8L3Q5GJ75 292 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 C9orf64Q5T6V5 341 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 GPR20Q99678 358 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 OTCP00480 354 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 FGFR3P22607 806 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 GCNT1Q02742 428 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 USP49Q70CQ1 688 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 CHST9Q7L1S5 443 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 ACTRT1Q8TDG2 376 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 ZBTB45Q96K62 511 aaPredicted RBP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 AP1S3Q96PC3 154 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 FFAR3O14843 346 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 GPR42O15529 346 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 VSTM1Q6UX27 236 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 C8orf59Q8N0T1 100 aaPredicted RBP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 GPN1Q9HCN4 374 aaPredicted RBP17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 SLC35C2Q9NQQ7 365 aa17.13■□□□□ 0.33
SPTBN4-212ENST00000598249 SIGLEC16A6NMB1 481 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 HGFP14210 728 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 BGNP21810 368 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 PTCD2Q8WV60 388 aaKnown RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 EXOC2Q96KP1 924 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 TIMMDC1Q9NPL8 285 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 FAM25EA8MYX2 175 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 CCNCP24863 283 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 ELK3P41970 407 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 CTSOP43234 321 aaPredicted RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 ARFIP1P53367 373 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 GALNT3Q14435 633 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 BMT2Q1RMZ1 405 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 DNASE1L2Q92874 299 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 CDC42EP4Q9H3Q1 356 aaKnown RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 HES2Q9Y543 173 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 TSPAN4O14817 238 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 PLSCR1O15162 318 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 FSBPO95073 299 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 CORO1AP31146 461 aaKnown RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 BROXQ5VW32 411 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 SRFBP1Q8NEF9 429 aaKnown RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 C11orf49Q9H6J7 331 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 ZNF224Q9NZL3 707 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 STOX2Q9P2F5 926 aaPredicted RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 PCDHGB5Q9Y5G0 923 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 TRAFD1O14545 582 aaPredicted RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 LIN7AO14910 233 aaPredicted RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 UBOX5O94941 541 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 LTA4HP09960 611 aaKnown RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 PDHA2P29803 388 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 LARS2Q15031 903 aaKnown RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 FAM129CQ86XR2 697 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 PDLIM2Q96JY6 352 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 COPS8Q99627 209 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 PIM1P11309 404 aaPredicted RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 AP1S1P61966 158 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 RAB30Q15771 203 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 TXNDC11Q6PKC3 985 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 SPPL2BQ8TCT7 592 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 AARSD1Q9BTE6 412 aaKnown RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 PLAGL2Q9UPG8 496 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 NEMP2A6NFY4 417 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 SLITRK3O94933 977 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 NPR2P20594 1047 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 CAPN13Q6MZZ7 669 aaPredicted RBP17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 SLC9A6Q92581 669 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 TMEM125Q96AQ2 219 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 SGK2Q9HBY8 427 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 KCTD5Q9NXV2 234 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 MORF4L1Q9UBU8 362 aa17.12■□□□□ 0.33
SPTBN4-212ENST00000598249 ARHGEF28Q8N1W1 1705 aaKnown RBP17.11■□□□□ 0.33
SPTBN4-212ENST00000598249 SLC31A1O15431 190 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms