RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 WDFY3Q8IZQ1 3526 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 FREM2Q5SZK8 3169 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 A0A1W2PQM1 296 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 DXOO77932 396 aaKnown RBP15.01□□□□□ -0.01
LIG1-215ENST00000597901 IVLP07476 585 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 CDKN2BP42772 138 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 NR2C2P49116 596 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 ZNF75DP51815 510 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 COL9A2Q14055 689 aaPredicted RBP15.01□□□□□ -0.01
LIG1-215ENST00000597901 TFDP2Q14188 446 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 LLGL1Q15334 1064 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 SPA17Q15506 151 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 C14orf28Q4W4Y0 310 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 CERCAMQ5T4B2 595 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 NT5DC3Q86UY8 548 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 Q8N9G6 341 aaPredicted RBP15.01□□□□□ -0.01
LIG1-215ENST00000597901 EXD1Q8NHP7 514 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 IMP4Q96G21 291 aaKnown RBP15.01□□□□□ -0.01
LIG1-215ENST00000597901 SCARF2Q96GP6 870 aaPredicted RBP15.01□□□□□ -0.01
LIG1-215ENST00000597901 HIC2Q96JB3 615 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 GFM1Q96RP9 751 aaKnown RBP15.01□□□□□ -0.01
LIG1-215ENST00000597901 ADGRE3Q9BY15 652 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 GSDMCQ9BYG8 508 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 SLC25A51Q9H1U9 297 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 LRRN3Q9H3W5 708 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 SYNDIG1Q9H7V2 258 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 SEPT10Q9P0V9 454 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 LRIT1Q9P2V4 623 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 SAE1Q9UBE0 346 aaPredicted RBP15.01□□□□□ -0.01
LIG1-215ENST00000597901 APPL1Q9UKG1 709 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 SATB2Q9UPW6 733 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 EPN1Q9Y6I3 576 aaPredicted RBP15.01□□□□□ -0.01
LIG1-215ENST00000597901 RNF215Q9Y6U7 377 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 CHD6Q8TD26 2715 aa15.01□□□□□ -0.01
LIG1-215ENST00000597901 PKD1L2Q7Z442 2459 aa15□□□□□ -0.01
LIG1-215ENST00000597901 B4DGG1 531 aa15□□□□□ -0.01
LIG1-215ENST00000597901 PPP1R12AO14974 1030 aaPredicted RBP15□□□□□ -0.01
LIG1-215ENST00000597901 CST8O60676 142 aa15□□□□□ -0.01
LIG1-215ENST00000597901 ZRANB2O95218 330 aaKnown RBP eCLIP15□□□□□ -0.01
LIG1-215ENST00000597901 RPLP0P05388 317 aaKnown RBP15□□□□□ -0.01
LIG1-215ENST00000597901 PYGLP06737 847 aa15□□□□□ -0.01
LIG1-215ENST00000597901 PNLIPP16233 465 aa15□□□□□ -0.01
LIG1-215ENST00000597901 AK4P27144 223 aaPredicted RBP15□□□□□ -0.01
LIG1-215ENST00000597901 RBMS1P29558 406 aaKnown RBP15□□□□□ -0.01
LIG1-215ENST00000597901 ADCY8P40145 1251 aa15□□□□□ -0.01
LIG1-215ENST00000597901 SPINT3P49223 89 aa15□□□□□ -0.01
LIG1-215ENST00000597901 ERVPABLB-1P60509 514 aa15□□□□□ -0.01
LIG1-215ENST00000597901 CTBSQ01459 385 aa15□□□□□ -0.01
LIG1-215ENST00000597901 ILF3Q12906 894 aaKnown RBP eCLIP15□□□□□ -0.01
LIG1-215ENST00000597901 HLTFQ14527 1009 aaKnown RBP eCLIP15□□□□□ -0.01
LIG1-215ENST00000597901 TEX44Q53QW1 395 aa15□□□□□ -0.01
LIG1-215ENST00000597901 C3orf38Q5JPI3 329 aa15□□□□□ -0.01
LIG1-215ENST00000597901 DOK6Q6PKX4 331 aa15□□□□□ -0.01
LIG1-215ENST00000597901 SPOCD1Q6ZMY3 1216 aa15□□□□□ -0.01
LIG1-215ENST00000597901 BZW1Q7L1Q6 419 aaKnown RBP15□□□□□ -0.01
LIG1-215ENST00000597901 KDELC2Q7Z4H8 507 aa15□□□□□ -0.01
LIG1-215ENST00000597901 C17orf82Q86X59 251 aaPredicted RBP15□□□□□ -0.01
LIG1-215ENST00000597901 RCOR2Q8IZ40 523 aa15□□□□□ -0.01
LIG1-215ENST00000597901 CCHCR1Q8TD31 782 aa15□□□□□ -0.01
LIG1-215ENST00000597901 CRELD1Q96HD1 420 aa15□□□□□ -0.01
LIG1-215ENST00000597901 PRR11Q96HE9 360 aaPredicted RBP15□□□□□ -0.01
LIG1-215ENST00000597901 SLC46A1Q96NT5 459 aa15□□□□□ -0.01
LIG1-215ENST00000597901 TRIB3Q96RU7 358 aa15□□□□□ -0.01
LIG1-215ENST00000597901 WDR24Q96S15 920 aa15□□□□□ -0.01
LIG1-215ENST00000597901 GOLPH3Q9H4A6 298 aa15□□□□□ -0.01
LIG1-215ENST00000597901 FAM83DQ9H4H8 585 aa15□□□□□ -0.01
LIG1-215ENST00000597901 TAAR2Q9P1P5 351 aa15□□□□□ -0.01
LIG1-215ENST00000597901 CNOT6Q9ULM6 557 aaKnown RBP15□□□□□ -0.01
LIG1-215ENST00000597901 PLEKHM1Q9Y4G2 1056 aa15□□□□□ -0.01
LIG1-215ENST00000597901 ST14Q9Y5Y6 855 aa15□□□□□ -0.01
LIG1-215ENST00000597901 APC2O95996 2303 aa15□□□□□ -0.01
LIG1-215ENST00000597901 LRRK1Q38SD2 2015 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 A0A0A6YYK5 440 aaPredicted RBP14.99□□□□□ -0.01
LIG1-215ENST00000597901 C1orf232A0A0U1RR37 186 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 RGSL1A5PLK6 1076 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 TMX2-CTNND1H3BSU7 103 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 INPP4BO15327 924 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 B4GAT1O43505 415 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 PSTPIP1O43586 416 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 NUDT21O43809 227 aaKnown RBP14.99□□□□□ -0.01
LIG1-215ENST00000597901 HOXB3P14651 431 aaPredicted RBP14.99□□□□□ -0.01
LIG1-215ENST00000597901 CYLC1P35663 651 aaPredicted RBP14.99□□□□□ -0.01
LIG1-215ENST00000597901 PDX1P52945 283 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 ADCY2Q08462 1091 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 CCDC173Q0VFZ6 552 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 KAZNQ674X7 775 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 IGF2-ASQ6U949 168 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 TRIM74Q86UV6 250 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 CCNJLQ8IV13 435 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 WDR36Q8NI36 951 aaKnown RBP14.99□□□□□ -0.01
LIG1-215ENST00000597901 KIAA1524Q8TCG1 905 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 ZDHHC1Q8WTX9 485 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 TADA1Q96BN2 335 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 EID2BQ96D98 161 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 MRFAP1L1Q96HT8 127 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 COX14Q96I36 57 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 TEKT5Q96M29 485 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 PANX2Q96RD6 677 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 GLOD4Q9HC38 313 aa14.99□□□□□ -0.01
LIG1-215ENST00000597901 ASCL3Q9NQ33 180 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms