RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 RXFP3Q9NSD7 469 aa19.27■□□□□ 0.67
PNKP-207ENST00000596014 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.27■□□□□ 0.67
PNKP-207ENST00000596014 MYLKQ15746 1914 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 CTSKP43235 329 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 NXPH1P58417 271 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 YPEL5P62699 121 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 TUBB4BP68371 445 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 DR1Q01658 176 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 CDH17Q12864 832 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 PPP1R21Q6ZMI0 780 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 ALYREFQ86V81 257 aaKnown RBP19.26■□□□□ 0.67
PNKP-207ENST00000596014 SLC22A18ASQ8N1D0 253 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 DNAAF3Q8N9W5 541 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 RIOK2Q9BVS4 552 aaKnown RBP19.26■□□□□ 0.67
PNKP-207ENST00000596014 FAM83DQ9H4H8 585 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 GPR27Q9NS67 375 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 CFAP54Q96N23 3096 aa19.26■□□□□ 0.67
PNKP-207ENST00000596014 TCRBV7S3A2A0A539 114 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 TOR1BO14657 336 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 TPSB2P20231 275 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 TRIM23P36406 574 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 MAGEA6P43360 314 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 CDK16Q00536 496 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 PTK6Q13882 451 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 KCNJ11Q14654 390 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 TAF1AQ15573 450 aaPredicted RBP19.25■□□□□ 0.67
PNKP-207ENST00000596014 TPSAB1Q15661 275 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 IL27RAQ6UWB1 636 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 SYDE1Q6ZW31 735 aaPredicted RBP19.25■□□□□ 0.67
PNKP-207ENST00000596014 ZNF572Q7Z3I7 529 aaPredicted RBP19.25■□□□□ 0.67
PNKP-207ENST00000596014 DCP2Q8IU60 420 aaKnown RBP19.25■□□□□ 0.67
PNKP-207ENST00000596014 APOOQ9BUR5 198 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 GTPBP2Q9BX10 602 aaKnown RBP19.25■□□□□ 0.67
PNKP-207ENST00000596014 BPIFA1Q9NP55 256 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 CASS4Q9NQ75 786 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 GDF3Q9NR23 364 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 IL17CQ9P0M4 197 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 OR1A2Q9Y585 309 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 ARL5AQ9Y689 179 aa19.25■□□□□ 0.67
PNKP-207ENST00000596014 TDRD6O60522 2096 aaKnown RBP19.25■□□□□ 0.67
PNKP-207ENST00000596014 C2orf81A6NN90 581 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 BUD23O43709 281 aaKnown RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 TSHRP16473 764 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 BPIP17213 487 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 ADCY8P40145 1251 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 C2orf54Q08AI8 447 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 PDE1CQ14123 709 aaPredicted RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 DHX34Q14147 1143 aaKnown RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 HLA-BQ31612 363 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 AASDHQ4L235 1098 aaPredicted RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 TPRG1LQ5T0D9 272 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 RAET1GQ6H3X3 334 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 JAMLQ86YT9 394 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 KIAA2013Q8IYS2 634 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 GPR26Q8NDV2 337 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 CPT1BQ92523 772 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 CDH19Q9H159 772 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 RAD18Q9NS91 495 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.24■□□□□ 0.67
PNKP-207ENST00000596014 ASIC3Q9UHC3 531 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 DMXL1Q9Y485 3027 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 SPTY2D1-AS1A0A0U1RR47 76 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 TTI1O43156 1089 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 CRTAMO95727 393 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 SOD1P00441 154 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 LPOP22079 712 aaPredicted RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 GPR1P46091 355 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 THOP1P52888 689 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 ATXN3P54252 364 aaPredicted RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 DCDC1P59894 354 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 PTPRCAPQ14761 206 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 POU6F1Q14863 301 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 PRAMEF14Q5SWL7 426 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 HENMT1Q5T8I9 393 aaKnown RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 OR2I1PQ8NGU4 316 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 FUBP1Q96AE4 644 aaKnown RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 AGAP2Q99490 1192 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 EDEM2Q9BV94 578 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 NFKBIL1Q9UBC1 381 aaPredicted RBP19.24■□□□□ 0.67
PNKP-207ENST00000596014 PKP3Q9Y446 797 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 KCTD3Q9Y597 815 aa19.24■□□□□ 0.67
PNKP-207ENST00000596014 CDX4O14627 284 aaPredicted RBP19.23■□□□□ 0.67
PNKP-207ENST00000596014 STX7O15400 261 aaKnown RBP19.23■□□□□ 0.67
PNKP-207ENST00000596014 LDB2O43679 373 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 GDF9O60383 454 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 TEAD1P28347 426 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 CERCAMQ5T4B2 595 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 ANKRD22Q5VYY1 191 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 MINDY1Q8N5J2 469 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 TEX101Q9BY14 249 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 GAREM1Q9H706 876 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 WDR26Q9H7D7 661 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 ANKZF1Q9H8Y5 726 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 ERVMER34-1Q9H9K5 563 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 BPTFQ12830 3046 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 CEP250Q9BV73 2442 aa19.23■□□□□ 0.67
PNKP-207ENST00000596014 ASCC3Q8N3C0 2202 aaKnown RBP19.22■□□□□ 0.67
PNKP-207ENST00000596014 PPFIA2O75334 1257 aa19.22■□□□□ 0.67
PNKP-207ENST00000596014 PYGLP06737 847 aa19.22■□□□□ 0.67
PNKP-207ENST00000596014 HOXC4P09017 264 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms