RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 RSPO4Q2I0M5 234 aaPredicted RBP14.31□□□□□ -0.12
LIG1-208ENST00000595758 MACC1Q6ZN28 852 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 GLT6D1Q7Z4J2 308 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 FUBP1Q96AE4 644 aaKnown RBP14.31□□□□□ -0.12
LIG1-208ENST00000595758 DDX47Q9H0S4 455 aaKnown RBP14.31□□□□□ -0.12
LIG1-208ENST00000595758 PHPT1Q9NRX4 125 aaPredicted RBP14.31□□□□□ -0.12
LIG1-208ENST00000595758 TM7SF3Q9NS93 570 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 DNAJC28Q9NX36 388 aa14.31□□□□□ -0.12
LIG1-208ENST00000595758 C2orf81A6NN90 581 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 SLC30A4O14863 429 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 YKT6O15498 198 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 BPIP17213 487 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 TPH1P17752 444 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 VPS41P49754 854 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 KIAA1024LP59773 190 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 BASP1P80723 227 aaKnown RBP14.3□□□□□ -0.12
LIG1-208ENST00000595758 IL9RQ01113 521 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 GPS1Q13098 491 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 MSLNQ13421 630 aaPredicted RBP14.3□□□□□ -0.12
LIG1-208ENST00000595758 SUZ12Q15022 739 aaKnown RBP14.3□□□□□ -0.12
LIG1-208ENST00000595758 SHBQ15464 509 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 TAF1AQ15573 450 aaPredicted RBP14.3□□□□□ -0.12
LIG1-208ENST00000595758 KCTD19Q17RG1 926 aaPredicted RBP14.3□□□□□ -0.12
LIG1-208ENST00000595758 ZNF542PQ5EBM4 170 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 ALS2CLQ60I27 953 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 ADAMTSL4Q6UY14 1074 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 PPP1R21Q6ZMI0 780 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 PARGQ86W56 976 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 HEATR4Q86WZ0 1026 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 DNAAF3Q8N9W5 541 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 GPR26Q8NDV2 337 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 OR52K1Q8NGK4 314 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 BRSK1Q8TDC3 778 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 AGAP2Q99490 1192 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 TEX101Q9BY14 249 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 BPIFA1Q9NP55 256 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 EIF2B3Q9NR50 452 aaKnown RBP14.3□□□□□ -0.12
LIG1-208ENST00000595758 IL17CQ9P0M4 197 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 NEU2Q9Y3R4 380 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 PKP3Q9Y446 797 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 PCDHGB2Q9Y5G2 931 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 LAMA1P25391 3075 aa14.3□□□□□ -0.12
LIG1-208ENST00000595758 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 CCDC188H7C350 402 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 STX7O15400 261 aaKnown RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 BUD23O43709 281 aaKnown RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 PCDHGA12O60330 932 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 PPFIA2O75334 1257 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 ECEL1O95672 775 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 CRTAMO95727 393 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 SOD1P00441 154 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 CSF2P04141 144 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 TUBB4AP04350 444 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 MYCLP1P12525 358 aaPredicted RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 CD59P13987 128 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 LPOP22079 712 aaPredicted RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 KELP23276 732 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 DCDC1P59894 354 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 CDK3Q00526 305 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 CDH17Q12864 832 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 EIF2B5Q13144 721 aaKnown RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 PPP1R7Q15435 360 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 HENMT1Q5T8I9 393 aaKnown RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 ZDHHC20Q5W0Z9 365 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 ENPP7Q6UWV6 458 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 WDR92Q96MX6 357 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 LGR4Q9BXB1 951 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 SPATA16Q9BXB7 569 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 PIH1D1Q9NWS0 290 aaKnown RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■■■□ 22.1
LIG1-208ENST00000595758 NFKBIL1Q9UBC1 381 aaPredicted RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 PCYOX1Q9UHG3 505 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 ARL5AQ9Y689 179 aa14.29□□□□□ -0.12
LIG1-208ENST00000595758 ASCC3Q8N3C0 2202 aaKnown RBP14.29□□□□□ -0.12
LIG1-208ENST00000595758 TMEM202A6NGA9 273 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 NME1P15531 152 aaKnown RBP14.28□□□□□ -0.12
LIG1-208ENST00000595758 JUNDP17535 347 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 EPHA8P29322 1005 aaPredicted RBP14.28□□□□□ -0.12
LIG1-208ENST00000595758 GRIA1P42261 906 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 HNRNPKP61978 463 aaKnown RBP eCLIP14.28□□□□□ -0.12
LIG1-208ENST00000595758 PDE1BQ01064 536 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 PPARDQ03181 441 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 BNIP3Q12983 259 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 POU6F1Q14863 301 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 TRAM1L1Q8N609 369 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 OR56A4Q8NGH8 313 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 SAP25Q8TEE9 199 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 ZNF592Q92610 1267 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 SLCO2A1Q92959 643 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 HIC2Q96JB3 615 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 RUNDC3BQ96NL0 473 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 PLEKHG4BQ96PX9 1271 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 ZSCAN5AQ9BUG6 496 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 SLC13A1Q9BZW2 595 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 IL26Q9NPH9 171 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 CASS4Q9NQ75 786 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 KLQ9UEF7 1012 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 KLF15Q9UIH9 416 aa14.28□□□□□ -0.12
LIG1-208ENST00000595758 KCTD3Q9Y597 815 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms