RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 WDR24Q96S15 920 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 AGAP2Q99490 1192 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 FICDQ9BVA6 458 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 RIOK2Q9BVS4 552 aaKnown RBP14.51□□□□□ -0.09
VRK3-206ENST00000594090 GPR63Q9BZJ6 419 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 SLC13A1Q9BZW2 595 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 TOR4AQ9NXH8 423 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 NLGN3Q9NZ94 848 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 SPASTQ9UBP0 616 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 AAR2Q9Y312 384 aaKnown RBP14.51□□□□□ -0.09
VRK3-206ENST00000594090 JRKLQ9Y4A0 524 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 CSNK1G3Q9Y6M4 447 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 PCNX2A6NKB5 2137 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 RGSL1A5PLK6 1076 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 NEMP2A6NFY4 417 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 PDE2AO00408 941 aaPredicted RBP14.5□□□□□ -0.09
VRK3-206ENST00000594090 TRIM38O00635 465 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 TNFRSF10CO14798 259 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 SCAMP1O15126 338 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 SIGLEC6O43699 453 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 CEP104O60308 925 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 GCATO75600 419 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 LDOC1O95751 146 aaPredicted RBP14.5□□□□□ -0.09
VRK3-206ENST00000594090 AGTP01019 485 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 FGGP02679 453 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 FGF1P05230 155 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 ALPPL2P10696 532 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 PMLP29590 882 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 ADRA1AP35348 466 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 DCDC1P59894 354 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 SNX1Q13596 522 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 PROX2Q3B8N5 592 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 ZNF569Q5MCW4 686 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 HENMT1Q5T8I9 393 aaKnown RBP14.5□□□□□ -0.09
VRK3-206ENST00000594090 ADAMTSL4Q6UY14 1074 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 TMC3Q7Z5M5 1100 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 KLHDC8BQ8IXV7 354 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 SLC35F6Q8N357 371 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 C1orf54Q8WWF1 131 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 RTP4Q96DX8 246 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 FRMD8Q9BZ67 464 aaPredicted RBP14.5□□□□□ -0.09
VRK3-206ENST00000594090 TRABDQ9H4I3 376 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 MRPL40Q9NQ50 206 aaKnown RBP14.5□□□□□ -0.09
VRK3-206ENST00000594090 DGKBQ9Y6T7 804 aa14.5□□□□□ -0.09
VRK3-206ENST00000594090 PRSS38A1L453 326 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 USP27XA6NNY8 438 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 AURKAO14965 403 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 METTL18O95568 372 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 OLIG2Q13516 323 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 C1orf61Q13536 156 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 PARP6Q2NL67 630 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 P3H1Q32P28 736 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 HS1BP3Q53T59 392 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 RD3Q7Z3Z2 195 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 SLCO6A1Q86UG4 719 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 MAIP1Q8WWC4 291 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 DUSP23Q9BVJ7 150 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 CLPBQ9H078 707 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 FAM83DQ9H4H8 585 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 HACD3Q9P035 362 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 NFKBIL1Q9UBC1 381 aaPredicted RBP14.49□□□□□ -0.09
VRK3-206ENST00000594090 ZNF148Q9UQR1 794 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 APOBEC2Q9Y235 224 aaKnown RBP14.49□□□□□ -0.09
VRK3-206ENST00000594090 ZKSCAN5Q9Y2L8 839 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 CACNA1AO00555 2505 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 FADS2P1A8MWK0 482 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 LMO7DNF2Z398 122 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 KIF5CO60282 957 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 DKK1O94907 266 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 TNFP01375 233 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 CELA2BP08218 269 aaPredicted RBP14.49□□□□□ -0.09
VRK3-206ENST00000594090 CTSEP14091 401 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 STIP1P31948 543 aaKnown RBP14.49□□□□□ -0.09
VRK3-206ENST00000594090 CCDC173Q0VFZ6 552 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 FOXC1Q12948 553 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 DNAJC3Q13217 504 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 ELOCQ15369 112 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 CCNG2Q16589 344 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 LONRF2Q1L5Z9 754 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 DEFB133Q30KQ1 61 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 ALS2CLQ60I27 953 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 KCTD11Q693B1 232 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 RANBP10Q6VN20 620 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 GLT6D1Q7Z4J2 308 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 TRIM74Q86UV6 250 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 FSTL5Q8N475 847 aaPredicted RBP14.49□□□□□ -0.09
VRK3-206ENST00000594090 TTC30BQ8N4P2 665 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 PNPLA1Q8N8W4 532 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 GPR26Q8NDV2 337 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 BLOC1S5Q8TDH9 187 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 COX14Q96I36 57 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 HIC2Q96JB3 615 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 APOL2Q9BQE5 337 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 CYP4F12Q9HCS2 524 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 RAD18Q9NS91 495 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 MOSPD1Q9UJG1 213 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 PYCARDQ9ULZ3 195 aa14.49□□□□□ -0.09
VRK3-206ENST00000594090 CNOT1A5YKK6 2376 aaKnown RBP14.48□□□□□ -0.09
VRK3-206ENST00000594090 TPP1O14773 563 aa14.48□□□□□ -0.09
VRK3-206ENST00000594090 INPP4BO15327 924 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms