RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ZNF438Q7Z4V0 828 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 DTX1Q86Y01 620 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 LZTR1Q8N653 840 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 IL22RA1Q8N6P7 574 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 NIPA2Q8N8Q9 360 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 PATE1Q8WXA2 126 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 DTD2Q96FN9 168 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 ZNF599Q96NL3 588 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 TEX101Q9BY14 249 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 FRMD8Q9BZ67 464 aaPredicted RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 MRPL47Q9HD33 250 aaKnown RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 TRNAU1APQ9NX07 287 aaKnown RBP14.71□□□□□ -0.05
PNKP-202ENST00000593706 IL17BQ9UHF5 180 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 PCDHGC4Q9Y5F7 938 aa14.71□□□□□ -0.05
PNKP-202ENST00000593706 IGHV5-10-1A0A0J9YXX1 117 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.7□□□□□ -0.06
PNKP-202ENST00000593706 H3BRJ5 948 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 CEACAM5P06731 702 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 WT1P19544 449 aaPredicted RBP14.7□□□□□ -0.06
PNKP-202ENST00000593706 GPR3P46089 330 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 ZNF135P52742 658 aaPredicted RBP14.7□□□□□ -0.06
PNKP-202ENST00000593706 DPYSQ14117 519 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 CLPPQ16740 277 aaPredicted RBP14.7□□□□□ -0.06
PNKP-202ENST00000593706 TMCO3Q6UWJ1 677 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 NRROSQ86YC3 692 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 VSTM4Q8IW00 320 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 TP53INP2Q8IXH6 220 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 ATPAF2Q8N5M1 289 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 NSMCE1Q8WV22 266 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 HTR3CQ8WXA8 447 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 NSMCE3Q96MG7 304 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 TAAR9Q96RI9 348 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 NUDCD1Q96RS6 583 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 B3GNT4Q9C0J1 378 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 CWC15Q9P013 229 aaKnown RBP14.7□□□□□ -0.06
PNKP-202ENST00000593706 MYO1AQ9UBC5 1043 aa14.7□□□□□ -0.06
PNKP-202ENST00000593706 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■□□□ 14.3
PNKP-202ENST00000593706 NPIPB15A6NHN6 443 aaPredicted RBP14.69□□□□□ -0.06
PNKP-202ENST00000593706 PSMD11O00231 422 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 TERTO14746 1132 aaKnown RBP14.69□□□□□ -0.06
PNKP-202ENST00000593706 HTRA2O43464 458 aaPredicted RBP14.69□□□□□ -0.06
PNKP-202ENST00000593706 TPM3P06753 285 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 ITGB6P18564 788 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 LHCGRP22888 699 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 CSTF2P33240 577 aaKnown RBP eCLIP14.69□□□□□ -0.06
PNKP-202ENST00000593706 ARL4AP40617 200 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 ACTR1BP42025 376 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 POLD2P49005 469 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 HCAR3P49019 387 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 LIMK2P53671 638 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 ACTR1AP61163 376 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 CTBSQ01459 385 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 SLC25A11Q02978 314 aaKnown RBP14.69□□□□□ -0.06
PNKP-202ENST00000593706 TRA2AQ13595 282 aaKnown RBP eCLIP14.69□□□□□ -0.06
PNKP-202ENST00000593706 NR1D2Q14995 579 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 NFKBIBQ15653 356 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 DPYSL2Q16555 572 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 TXNRD3NBQ6F5E7 133 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 ALKBH5Q6P6C2 394 aaKnown RBP14.69□□□□□ -0.06
PNKP-202ENST00000593706 ZNF574Q6ZN55 896 aaPredicted RBP14.69□□□□□ -0.06
PNKP-202ENST00000593706 USP45Q70EL2 814 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 C17orf82Q86X59 251 aaPredicted RBP14.69□□□□□ -0.06
PNKP-202ENST00000593706 FAM129CQ86XR2 697 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 AGBL5Q8NDL9 886 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 SPOCK2Q92563 424 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 ART4Q93070 314 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 SEMA3CQ99985 751 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 NOD2Q9HC29 1040 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 PHTF1Q9UMS5 762 aa14.69□□□□□ -0.06
PNKP-202ENST00000593706 CBFA2T2O43439 604 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 SUV39H1O43463 412 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 FUCA1P04066 466 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 FGF3P11487 239 aaPredicted RBP14.68□□□□□ -0.06
PNKP-202ENST00000593706 CD1CP29017 333 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 CSF2RBP32927 897 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 ADCY8P40145 1251 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 GPR1P46091 355 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 MAXP61244 160 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 TRAF2Q12933 501 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 TRIM14Q14142 442 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 SMTNL2Q2TAL5 461 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 ARMC12Q5T9G4 340 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 NKAIN2Q5VXU1 208 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 Q6ZVL8 140 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 TSPAN33Q86UF1 283 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 NAGSQ8N159 534 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 PGBD5Q8N414 524 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 RNF214Q8ND24 703 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 OR4D9Q8NGE8 314 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 PTCD2Q8WV60 388 aaKnown RBP14.68□□□□□ -0.06
PNKP-202ENST00000593706 HSPH1Q92598 858 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 PMEPA1Q969W9 287 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 BTBD6Q96KE9 485 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 OR2M4Q96R27 311 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 MGME1Q9BQP7 344 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 NUP85Q9BW27 656 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.68□□□□□ -0.06
PNKP-202ENST00000593706 KCNK4Q9NYG8 393 aa14.68□□□□□ -0.06
PNKP-202ENST00000593706 CD84Q9UIB8 345 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms