RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 TRIM29Q14134 588 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 HNF4GQ14541 408 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 BAK1Q16611 211 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 DNAJC21Q5F1R6 531 aaKnown RBP5.05□□□□□ -1.6
SMAD4-216ENST00000593223 PRAMEF19Q5SWL8 479 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 SLC9C2Q5TAH2 1124 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 B4GALNT2Q8NHY0 566 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 MIB2Q96AX9 1013 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 ZMAT2Q96NC0 199 aaKnown RBP5.05□□□□□ -1.6
SMAD4-216ENST00000593223 SIN3AQ96ST3 1273 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 SEC62Q99442 399 aaKnown RBP5.05□□□□□ -1.6
SMAD4-216ENST00000593223 MSTO1Q9BUK6 570 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 HEMGNQ9BXL5 484 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 HIPK2Q9H2X6 1198 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 TMEM51Q9NW97 253 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 ANKRD10Q9NXR5 420 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 SLC25A10Q9UBX3 287 aaPredicted RBP5.05□□□□□ -1.6
SMAD4-216ENST00000593223 CARD8Q9Y2G2 431 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 TMEM98Q9Y2Y6 226 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 PAM16Q9Y3D7 125 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 EHBP1L1Q8N3D4 1523 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 EVPLQ92817 2033 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 NRAPQ86VF7 1730 aa5.05□□□□□ -1.6
SMAD4-216ENST00000593223 NALCNQ8IZF0 1738 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 CBY3A6NI87 242 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 KLRF2D3W0D1 207 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 RGS11O94810 467 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 PRSS2P07478 247 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 NGFRP08138 427 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 HSPA8P11142 646 aaKnown RBP5.04□□□□□ -1.6
SMAD4-216ENST00000593223 SRD5A1P18405 259 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 KRT20P35900 424 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 THBS3P49746 956 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 NR1H2P55055 460 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 CRYZQ08257 329 aaKnown RBP5.04□□□□□ -1.6
SMAD4-216ENST00000593223 PLCB4Q15147 1175 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 TYW3Q6IPR3 259 aaKnown RBP5.04□□□□□ -1.6
SMAD4-216ENST00000593223 KLHL10Q6JEL2 608 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 FJX1Q86VR8 437 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 C9orf106Q8NAJ2 232 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 GJC3Q8NFK1 279 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 CENPTQ96BT3 561 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 RRP36Q96EU6 259 aaKnown RBP5.04□□□□□ -1.6
SMAD4-216ENST00000593223 RSRC1Q96IZ7 334 aaKnown RBP5.04□□□□□ -1.6
SMAD4-216ENST00000593223 BBS4Q96RK4 519 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 CENPOQ9BU64 300 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 SLC26A6Q9BXS9 759 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 PAIP1Q9H074 479 aaKnown RBP5.04□□□□□ -1.6
SMAD4-216ENST00000593223 ANKEF1Q9NU02 776 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 CYP46A1Q9Y6A2 500 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 IKBKGQ9Y6K9 419 aa5.04□□□□□ -1.6
SMAD4-216ENST00000593223 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 HSPB2A8KAH6 182 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 SMAD6O43541 496 aaKnown RBP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 HTATSF1O43719 755 aaKnown RBP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 GFPT2O94808 682 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 CD4P01730 458 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ACAA1P09110 424 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ABCD3P28288 659 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 RYKP34925 604 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 RPL3P39023 403 aaKnown RBP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 Q0VFX4 171 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ST3GAL1Q11201 340 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 CTTNQ14247 550 aaKnown RBP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 PPP2R5BQ15173 497 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 HSPB2Q16082 182 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 CCNG2Q16589 344 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 PARP10Q53GL7 1025 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 TDRD12Q587J7 1177 aaKnown RBP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ITPRIPL1Q6GPH6 555 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 PLBD1Q6P4A8 553 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ZNF449Q6P9G9 518 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ZNF517Q6ZMY9 492 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 CCDC105Q8IYK2 499 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 PARP16Q8N5Y8 322 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 IQCF1Q8N6M8 205 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ADAMTS14Q8WXS8 1223 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 NEUROG1Q92886 237 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 TXNDC15Q96J42 360 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ZNF479Q96JC4 524 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 KLHL15Q96M94 604 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 LBHD1Q9BQE6 289 aaPredicted RBP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ANP32EQ9BTT0 268 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 ABCG4Q9H172 646 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 UBN1Q9NPG3 1134 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 CYSLTR2Q9NS75 346 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 C20orf141Q9NUB4 165 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 DCAF16Q9NXF7 216 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 NSMCE4AQ9NXX6 385 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 KCND2Q9NZV8 630 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 MPP6Q9NZW5 540 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 WNT16Q9UBV4 365 aa5.03□□□□□ -1.6
SMAD4-216ENST00000593223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMAD4-216ENST00000593223 A0A1B0GVM2 712 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 TRIM64A6NGJ6 449 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 TRIM64BA6NI03 449 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 SERPINI2O75830 405 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 GLUD1P00367 558 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 IRF1P10914 325 aa5.02□□□□□ -1.61
SMAD4-216ENST00000593223 EDN2P20800 178 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms