RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 IVLP07476 585 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 TEAD1P28347 426 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 FANCCQ00597 558 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 ZNF438Q7Z4V0 828 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 NAGSQ8N159 534 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 TEX26Q8N6G2 289 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 SYN2Q92777 582 aaPredicted RBP20.4■□□□□ 0.86
TRIM47-207ENST00000593089 AP2M1Q96CW1 435 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 NUDT22Q9BRQ3 303 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 FUCA2Q9BTY2 467 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 POLR1EQ9GZS1 481 aaKnown RBP20.4■□□□□ 0.86
TRIM47-207ENST00000593089 SEPT10Q9P0V9 454 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 RCOR3Q9P2K3 495 aaPredicted RBP20.4■□□□□ 0.86
TRIM47-207ENST00000593089 TMEM98Q9Y2Y6 226 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 TTLL3Q9Y4R7 772 aa20.4■□□□□ 0.86
TRIM47-207ENST00000593089 A0A087X0T9 212 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 C9orf172C9J069 976 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 J3QKU1 62 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 MYO1FO00160 1098 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 ZW10O43264 779 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 FZD6O60353 706 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 MAP3K6O95382 1288 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 SOD1P00441 154 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 FAM228BP0C875 321 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 GARSP41250 739 aaKnown RBP20.39■□□□□ 0.85
TRIM47-207ENST00000593089 ACTR1BP42025 376 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 EPHB1P54762 984 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 ACTR1AP61163 376 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 DPTQ07507 201 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 NR1D2Q14995 579 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 HADHQ16836 314 aaKnown RBP20.39■□□□□ 0.85
TRIM47-207ENST00000593089 ATP13A4Q4VNC1 1196 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 MANEAQ5SRI9 462 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 CCDC122Q5T0U0 273 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 NCBP2-AS2Q69YL0 99 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 ZNF574Q6ZN55 896 aaPredicted RBP20.39■□□□□ 0.85
TRIM47-207ENST00000593089 MARK2Q7KZI7 788 aaKnown RBP20.39■□□□□ 0.85
TRIM47-207ENST00000593089 TRIM74Q86UV6 250 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 VASH2Q86V25 355 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 LRRC49Q8IUZ0 686 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 RCBTB1Q8NDN9 531 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 SCAMP4Q969E2 229 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 CDH19Q9H159 772 aa20.39■□□□□ 0.85
TRIM47-207ENST00000593089 AKAP7Q9P0M2 348 aaPredicted RBP20.39■□□□□ 0.85
TRIM47-207ENST00000593089 AHCTF1Q8WYP5 2266 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 A0A0J9YYE9 177 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 B8ZZF3 427 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 PPM1DO15297 605 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 TRBC1P01850 177 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 CCL4P13236 92 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 CD1CP29017 333 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 PBX1P40424 430 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 TPM4P67936 248 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 ZBED6P86452 979 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 DSC2Q02487 901 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 PTSQ03393 145 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 GALNT2Q10471 571 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 DPYSL3Q14195 570 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 NKAIN2Q5VXU1 208 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 ADAMTSL4Q6UY14 1074 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 LUZP1Q86V48 1076 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 CPNE8Q86YQ8 564 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 FAM71BQ8TC56 605 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 SGF29Q96ES7 293 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 CCDC74BQ96LY2 380 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 OR2M4Q96R27 311 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 AGAP2Q99490 1192 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 CBX8Q9HC52 389 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 PCDHB11Q9Y5F2 797 aa20.38■□□□□ 0.85
TRIM47-207ENST00000593089 IGHV5-10-1A0A0J9YXX1 117 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 ARSEP51690 589 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 UBASH3AP57075 661 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 PEX6Q13608 980 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 IHHQ14623 411 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 PAFAH1B3Q15102 231 aaKnown RBP20.37■□□□□ 0.85
TRIM47-207ENST00000593089 TMEM164Q5U3C3 297 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 TIGD7Q6NT04 549 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-207ENST00000593089 ALKBH5Q6P6C2 394 aaKnown RBP20.37■□□□□ 0.85
TRIM47-207ENST00000593089 ZNF564Q8TBZ8 553 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-207ENST00000593089 LRRN4Q8WUT4 740 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 MAML1Q92585 1016 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 SCARF2Q96GP6 870 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-207ENST00000593089 RBM22Q9NW64 420 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRIM47-207ENST00000593089 CHKBQ9Y259 395 aa20.37■□□□□ 0.85
TRIM47-207ENST00000593089 ZFC3H1O60293 1989 aaKnown RBP20.37■□□□□ 0.85
TRIM47-207ENST00000593089 MATN3O15232 486 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 INPP4BO15327 924 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 ASMTLO95671 621 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 ZNF30P17039 623 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 GPR3P46089 330 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 IFI16Q16666 785 aaKnown RBP20.36■□□□□ 0.85
TRIM47-207ENST00000593089 CLPPQ16740 277 aaPredicted RBP20.36■□□□□ 0.85
TRIM47-207ENST00000593089 LINC00303Q3SY05 128 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 PYCR3Q53H96 274 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 ANKRD20A8PQ5CZ79 823 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 ZNF765Q7L2R6 523 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 DTX1Q86Y01 620 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 KCTD6Q8NC69 237 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 EXTL1Q92935 676 aa20.36■□□□□ 0.85
TRIM47-207ENST00000593089 RIOK2Q9BVS4 552 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms